STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97274.1Conserved hypothetical membrane protein; Contains two C-terminal transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein. (103 aa)    
Predicted Functional Partners:
CAZ97273.1
Conserved hypothetical membrane protein; Contains an N-terminal and a C-terminal transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.944
CAZ97272.1
Conserved hypothetical membrane protein; Contains an N-terminal and a C-terminal transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
       0.796
CAZ97275.1
Small protein that contain a C-terminal Smr (Small MutS Related) domain; The Smr domain would act as a nicking endonuclease and would interact with the MutS-1 protein; Belongs to the DNA mismatch repair mutS family; Localized in the cytoplasm; Function unclear.
 
     0.675
CAZ96433.1
Conserved hypothetical protein; Protein with an uncleaved signal peptide; Seems localized in the cytoplasmic membrane.
  
     0.539
CAZ96618.1
Conserved hypothetical membrane protein; Contains nine transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.532
CAZ94118.1
Conserved hypothetical protein. Localized in the cytoplasm.
  
     0.457
CAZ97830.1
Conserved hypothetical membrane protein; Contains a C-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.447
CAZ94548.1
RmlD substrate binding domain family protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
     0.447
CAZ95361.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.438
CAZ95992.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.433
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.