STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97275.1Small protein that contain a C-terminal Smr (Small MutS Related) domain; The Smr domain would act as a nicking endonuclease and would interact with the MutS-1 protein; Belongs to the DNA mismatch repair mutS family; Localized in the cytoplasm; Function unclear. (181 aa)    
Predicted Functional Partners:
CAZ98632.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.712
CAZ95844.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.710
CAZ94558.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.691
CAZ98685.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.682
CAZ97274.1
Conserved hypothetical membrane protein; Contains two C-terminal transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.675
CAZ97273.1
Conserved hypothetical membrane protein; Contains an N-terminal and a C-terminal transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.674
CAZ98902.1
Conserved hypothetical protein. Localized in the cytoplasm.
 
     0.671
CAZ94096.1
Conserved hypothetical protein. Localized in the cytoplasm.
  
     0.662
CAZ95469.1
Conserved integral membrane protein belonging to the UPF0104 family; Contains nine transmembrane helices; Localized in the cytoplasmic membrane; Family membership.
 
     0.660
CAZ97268.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.658
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.