STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97280.1Peptidase family M23 mainly contains endopeptidases that lyze bacterial cell wall peptidoglycans. One catalytic zinc ion is bound per peptidase molecule. The cation ligands occur in the conserved motifs HXXXD and HXH. The first histidine of the second motif is also involved in the catalysis. Features a signal peptide cleaved between the residues 18 and 19. Localized in the periplasm; Specificity unclear. (563 aa)    
Predicted Functional Partners:
CAZ97278.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.803
CAZ97279.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (24-102) and the Plug module (143-223) acting as a channel gate; The signal peptide is cleaved between the residues 23 and 24; High confidence in function and specificity.
       0.773
CAZ95782.1
Peptidase family M23 mainly contains endopeptidases that lyze bacterial cell wall peptidoglycans. One catalytic zinc ion is bound per peptidase molecule. The cation ligands occur in the conserved motifs HXXXD and HXH. The first histidine of the second motif is also involved in the catalysis. Contains a transmembrane helix in N-terminus. Localized in the cytoplasmic membrane; Specificity unclear.
  
     0.743
CAZ95495.1
Metallopeptidase, family M23; Endopeptidases that probably lyzes the bacterial cell wall peptidoglycan. One catalytic zinc ion is bound per peptidase molecule; Belongs to the M23 family of peptidases; Contains a putative lipoprotein signal peptide cleaved between the residues 16 and 17; Possibly loclaized in the outer membrane; Specificity unclear.
  
     0.732
CAZ97281.1
Conserved hypothetical protein; Localized in cytoplasm.
 
     0.661
CAZ97872.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space; Conserved hypothetical protein.
 
    0.610
CAZ97282.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.605
gldI
GldI, lipoprotein required for gliding motility, contains a Peptidyl-prolyl cis-trans isomerase (PPIase) domain; PPIases catalyze the peptidyl-prolyl isomerisation of the peptide bond preceding proline that is stabilised in the cis conformation in oligopeptides; GldI may be involved in folding cell envelope protein components of the motility machinery; Signal peptide cleaved between the residues 14 and 15; Localized in the outer membrane or/and cytoplasmic membrane; High confidence in function and specificity.
  
     0.567
CAZ95253.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
  
 0.556
CAZ97835.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.548
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.