STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97301.1Conserved hypothetical oxydoreductase; Contains an hypothetical N-terminal aldolase II domain and a C-terminal domain belonging to the short chain dehydrogenase family; Localized in the cytoplasm; Specificity unclear. (701 aa)    
Predicted Functional Partners:
CAZ97300.1
Carbohydrate kinase belonging to the FGGY family. Its exact specificity is unknown; Localized in the cytoplasm; Specificity unclear.
 
  
 0.968
CAZ94350.1
Sugar isomerase; Conserved protein belonging to the xylose isomerase family. Its exact specificity is unclear. Localized in the cytoplasm; Specificity unclear.
 
     0.836
CAZ97302.1
Transcriptional regulator involved in the repression and/or the positive regulation of genes encoding for enzymes; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcriptional regulators, involved in the binding of the protein to the operator sequences in the DNA. At the C-terminus there is an effector- binding/oligomerisation domain; Localized in the cytoplasm; Family membership.
 
     0.811
lldD1
L-lactate dehydrogenase is involved in L-lactate degradation converting the L-lactate to pyruvate; Uses flavin mononucleotide (FMN) as prosthetic group; Localized in the cytoplasm; High confidence in function and specificity.
  
 
 0.810
rhaA
Alpha-L-rhamnosidase, family GH78; Alpha-L-rhamnosidase catalyzes the hydrolysis of terminal non-reducing alpha-L-rhamnose residues in alpha-L-rhamnosides. It belongs to the family 78 of the glycoside hydrolases. Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; High confidence in function and specificity.
 
   0.568
CAZ96241.1
Transcriptional regulator involved in the repression and/or the positive regulation of genes encoding for enzymes; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcriptional regulators, involved in the binding of the protein to the operator sequences in the DNA. At the C-terminus there is an effector- binding/oligomerisation domain; Localized in the cytoplasm; Specificity unclear.
 
   0.541
CAZ94457.1
Type I polyketide synthases are modular enzymes involved in the synthesis of various polyketides. This enzyme encompasses five modules: beta-ketoacyl synthase (KS), acyltransferase (AC), dehydratase (DH), enoyl reductase (ER) and acyl carrier protein (ACP). This modular enzyme is homologous to mycocerosic acid synthase (EC 2.3.1.111). Binds 1 phosphopantetheine group covalently. Localized in the cytoplasmic membrane; Specificity unclear.
  
 
 0.519
CAZ97861.1
DeoR-type transcription regulator are repressors of sugar and nucleoside metabolic systems. The effector molecules are generally phosphorylated intermediates of the relevant metabolic pathway. Contains a N-terminal DNA-binding DeoR-type HTH domain. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. Localized in the cytoplasm; Specificity unclear.
  
  
 0.481
CAZ98821.1
Conserved hypothetical protein; Protein belonging to the DUF718 family, which includes the rhamnose mutarotase YiiL from Escherichia coli; Localized in the cytoplasm.
  
  
 0.467
xylB-2
Xylulose kinase is involved in xylose catabolism. It catalyzes the reaction: ATP + D-xylulose = ADP + D-xylulose 5-phosphate. Localized in the cytoplasm; High confidence in function and specificity.
  
  
 0.464
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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