STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97305.1Conserved hypothetical protein; Localized in the cytoplasm. (356 aa)    
Predicted Functional Partners:
CAZ97306.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
   
 0.940
CAZ97304.1
Conserved protein belonging to the DUF1080 family; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.914
CAZ97303.1
Cytochrome c-containing lipoprotein; Large conserved protein containing a C-terminal cytochrome C. Cytochromes c typically function in electron transfer, but c-type cytochrome centers are also found in the active sites of many enzymes; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 24 and 25; Localized in the outer membrane; Conserved hypothetical protein.
 
     0.896
CAZ97307.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.887
CAZ97310.1
NAD(P)-dependent oxidoreductase belonging to the GFO/IDH/MOCA family; Adopts a Rossmann fold; Localized in the cytoplasm; Specificity unclear.
 
    0.828
CAZ97309.1
Conserved protein belonging to the Xylose isomerase-like TIM barrel family; Localized in the cytoplasm; Family membership.
 
     0.747
CAZ97606.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 23 and 24; Putatively localized in the outer membrane but the determination of the membrane identity for the protein localization is not clear; Family membership.
  
     0.641
CAZ97308.1
The alpha/beta hydrolase-fold proteins catalyse a wide range of enzymatic reactions. They are characterized by a catalytic triad, usually an serine, an aspartic acid, and an histidine; The core of enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices; Belongs to alpha/beta hydrolase superfamily; Localized in the cytoplasm; Function unclear.
 
     0.607
CAZ94984.1
Large conserved protein containing a C-terminal cytochrome c. Cytochromes c typically function in electron transfer, but c-type cytochrome centers are also found in the active sites of many enzymes. Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 14 and 15; Localized in the outer membrane; Family membership.
  
    0.606
CAZ94982.1
D-Tagatose 3-epimerase catalyzes the epimerization of various ketohexoses at the C3 position. It folds into a Xylose isomerase-like TIM barrel. Localized in the cytoplasm; High confidence in function and specificity.
 
     0.593
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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