STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97309.1Conserved protein belonging to the Xylose isomerase-like TIM barrel family; Localized in the cytoplasm; Family membership. (270 aa)    
Predicted Functional Partners:
siaHI
Exo-alpha-sialidase catalyzes the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)- glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates. Features a twin-arginine signal peptide. Localized in the periplasm; High confidence in function and specificity.
  
 
  0.920
CAZ97310.1
NAD(P)-dependent oxidoreductase belonging to the GFO/IDH/MOCA family; Adopts a Rossmann fold; Localized in the cytoplasm; Specificity unclear.
 
    0.853
CAZ97308.1
The alpha/beta hydrolase-fold proteins catalyse a wide range of enzymatic reactions. They are characterized by a catalytic triad, usually an serine, an aspartic acid, and an histidine; The core of enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices; Belongs to alpha/beta hydrolase superfamily; Localized in the cytoplasm; Function unclear.
 
     0.797
CAZ97305.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.747
CAZ97306.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.635
CAZ97307.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.632
xylB-2
Xylulose kinase is involved in xylose catabolism. It catalyzes the reaction: ATP + D-xylulose = ADP + D-xylulose 5-phosphate. Localized in the cytoplasm; High confidence in function and specificity.
  
 
 0.539
CAZ94982.1
D-Tagatose 3-epimerase catalyzes the epimerization of various ketohexoses at the C3 position. It folds into a Xylose isomerase-like TIM barrel. Localized in the cytoplasm; High confidence in function and specificity.
 
     0.530
CAZ95197.1
NAD(P)-dependent oxidoreductase that adopts a Rossmann fold; belongs to the GFO/IDH/MOCA family; Localized in the cytoplasm; Specificity unclear.
 
    0.475
CAZ97887.1
Conserved hypothetical protein; Contains an N-terminal haloacid dehalogenase (HAD) domain; Localized in the cytoplasm.
  
    0.464
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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