STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97329.1Conserved hypothetical membrane protein; Could belong to the isoprenylcysteine carboxyl methyltransferase (ICMT) family; Contains four transmembrane helices; Localized in the cytoplasmic membrane; Family membership. (194 aa)    
Predicted Functional Partners:
CAZ97328.1
Transcriptional regulator featuring a helix-turn-helix DNA binding motif belonging to the Fur family. This family includes metal ion uptake regulator, that bind to the operator DNA and controls transcription of metal ion-responsive genes. Localized in the cytoplasm; Specificity unclear.
       0.611
CAZ97327.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (23-99) and the Plug module (124-228) acting as a channel gate; The signal peptide is cleaved between the residues 20 and 21; Family membership.
       0.605
CAZ97326.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the outer membrane; Conserved hypothetical protein.
       0.483
CAZ94111.1
Conserved hypothetical membrane protein; Could belong to the Isoprenylcysteine carboxyl methyltransferase (ICMT) family; Contains three transmembrane segments; Localized in the cytoplasmic membrane; Family membership.
  
     0.405
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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