STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97345.1Glyoxalase family protein; Protein of unknown function belonging to the glyocylase I family; Localized in the cytoplasm; Family membership. (143 aa)    
Predicted Functional Partners:
CAZ96283.1
NAD-dependent 2-hydroxyacid dehydrogenase which seems to be specific for the D-isomer of their substrate; Contains a NAD-binding domain; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family; Localized in the cytoplasm; Specificity unclear.
      0.799
gyaR
Glyoxylate reductase converts, in presence of NAD+, the Glycolate into glyoxylate. GyaR is involved in the glyoxylate metabolism (conversion of lipids into glucids); Contains a glycine-rich region located in the central section corresponding to the NAD-binding domain; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family; Localized in the cytoplasm; High confidence in function and specificity.
 
 
  
 0.439
CAZ95302.1
Flavoprotein; This is a family that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases; Seems to contain a FAD binding domain also found in the pyridine nucleotide-disulphide reductases (PNDR); Localized in the cytoplasm; Function unclear.
  
    0.411
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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