STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97355.1Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; Conserved hypothetical protein. (430 aa)    
Predicted Functional Partners:
CAZ95679.1
Rubredoxin family protein; Conserved protein containing a C-terminal Rubredoxin-like domain. The most conserved feature of the rubredoxin-like domain is the cluster of four cysteines involved in iron binding (Cys-x-x-Cys-x(n)-Cys-x-x-Cys). This domain folds into a short three-stranded antiparallel beta-sheet and a number of loops; Localized in the cytoplasm; Family membership.
 
     0.654
CAZ97356.1
Hypothetical protein. Putatively localized in the cytoplasm.
       0.548
CAZ97150.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Gene very often associated with a gene encoding for a TonB-dependent receptor or transducer; Contains a lipoprotein signal peptide cleaved between the residues 18 and 19; Probably localized in the outer membrane; Family membership.
  
    0.461
CAZ98685.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.434
CAZ95694.1
The sensor histidine kinase belongs to two-component signal transduction systems. It catalyzes the ATP dependent autophosphorylation of a conserved histidine in its phosphoacceptor domain and the signal dependent phosphorylation of a conserved aspartic acid present in the response regulator receiver domain; Contains two transmembrane segments and an N-terminal PAS/PAC domain involved in many signalling proteins where they are used as a signal sensor domain; Localized in the cytoplasmic membrane; Family membership.
  
     0.429
CAZ96133.1
OmpA-like outer membrane protein; This protein has a modular architecture composed of a N-terminal TPR motif, a central beta-propeller domain, encompassing three WD40 repeats, and a C-terminal OmpA domain. OmpA-like domains are thought to be responsible for non-covalent interactions with peptidoglycan. The tetratrico peptide repeat (TPR) is a structural motif, which mediates proteinprotein interactions; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the outer membrane; Function unclear.
  
 
 0.429
CAZ97151.1
TonB-dependent Transducer; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins; The presence of an additional N-terminal extension (Secretin/TonB (STN) domain) that probably interacts with an anti-sigma factor, would be responsible of the signal transduction; Contains a N-terminal carboxypeptidase regulatory domain (117-190), a Plug module (206-316) acting as the channel gate; The signal peptide is cleaved between the residue 22 and 23; Family membership.
  
     0.429
CAZ96247.1
This conserved protein belongs to the (Trans)glycosidase superfamily, which is included in the TIM beta/alpha-barrel fold. Distantly related to the glycoside hydrolases 36 (GH36); Localized in the cytoplasm; Family membership.
  
     0.424
CAZ95757.1
Conserved hypothetical protein; Contains a signal peptide cleaved between the residues 19 and 20; Localized in the periplasmic space.
  
     0.404
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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