STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94396.1The major facilitator superfamily (MFS) transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients; Contains 12 transmembrane segments; Localized in the cytoplasmic membrane; Family membership; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (462 aa)    
Predicted Functional Partners:
CAZ94397.1
Creatinase family protein; Conserved protein belonging to the creatine amidohydrolase family; Localized in the cytoplasm; Family membership.
       0.689
mroA1
Aldose 1-epimerase or Mutarotase is responsible for the anomeric interconversion of aldoses between their alpha- and beta-forms; It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; localized in the cytoplasm; High confidence in function and specificity.
 
     0.576
CAZ94433.1
Conserved hypothetical protein; Contains four tetratrico peptide repeats (TPRs). The TPR motif consists of 316 tandem-repeats of 34 amino acids residues. It adopts a helixturnhelix arrangement, with adjacent TPR motifs packing in a parallel fashion, resulting in a spiral of repeating anti-parallel alpha-helices. TPRs mediate proteinprotein interactions; Localized in the cytoplasm.
  
     0.414
CAZ94398.1
Sugar kinase; Enzymes that catalyzes the phosphorylation of sugars from ATP; Contains a transmembrane segment in the middle part of protein; Belongs to the ROK family; Seems localized in the cytoplasmic membrane; Family membership.
     
 0.403
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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