STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97525.1Rhs family protein; This conserved protein belongs to the Rhs family. It contains numerous repeats featuring a YD dipeptide, the most strongly conserved motif of the repeat. In Escherichia coli, a rhsA mutation reduces K5 biosynthesis suggesting a role for RhsA in coupling biosynthesis and export of capsular polysaccharides. Localized in the cytoplasm; Family membership. (1353 aa)    
Predicted Functional Partners:
CAZ97527.1
Vgr family protein; Conserved protein belonging to the Vgr family. The Vgr family proteins are associated with some classes of Rhs elements; Localized in the cytoplasm; Family membership.
 
  
 0.937
CAZ97526.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
    0.778
CAZ97524.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.757
CAZ94481.1
Vgr family protein; Conserved protein belonging to the Vgr family. The Vgr family proteins are associated with some classes of Rhs elements. Localized in the cytoplasm; Family membership.
 
  
 0.731
CAZ97523.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.492
CAZ97408.1
The Crp/Fnr-type transcriptional regulators complexe with cyclic AMP and bind to operator sites near the promoter with a C-terminal HTH domain to regulate the transcription of several catabolite-sensitive operons; They predominantly act as transcription activators, but can also be important repressors, and respond to diverse intracellular and exogenous signals; Localized in the cytoplasm; Family membership.
  
     0.475
CAZ97528.1
Putative protein.
       0.459
CAZ94472.1
Conserved protein containing two PKD domains. Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Family membership.
 
     0.455
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.