STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97540.1Conserved hypothetical protein; Localized in the cytoplasm. (272 aa)    
Predicted Functional Partners:
ppiB
Peptidyl-prolyl cis-trans isomerase, or PPIase or rotamase, accelerates the folding of proteins. It catalyzes the peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilised in the cis conformation in oligopeptides; Contains a N-terminal Cyclophilin type PPIase/CLD and a C-terminal FKBP-type peptidyl-prolyl cis- trans isomerase; Localized in the cytoplasm; High confidence in function and specificity.
   
 0.965
ppiA
Peptidyl-prolyl cis-trans isomerase, or PPIase or rotamase, accelerates the folding of proteins. It catalyzes the peptidyl-prolyl isomerisation during which the peptide bond preceding proline is stabilised in the cis conformation in oligopeptides; Contains a N-terminal Cyclophilin type PPIase/CLD domain and a C-terminal FKBP-type peptidyl-prolyl cis-trans isomerase domain; Signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; High confidence in function and specificity.
   
 0.965
htpG
Chaperone protein htpG; Molecular chaperone. Has ATPase activity.
    
 0.955
CAZ95809.1
Lipopolysaccharide core biosynthesis glycosyltransferase, family GT9; Glycosyltransferase catalyzes the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. This enzyme is a glycosyltransferase involved in the biosynthesis of the lipopolysaccharide core; Belongs to the family 9 of the glycosyltransferase (GT9); Localized in the cytoplasm; Specificity unclear.
  
 
 0.819
fdx
Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. It binds two 4Fe-4S clusters; Localized in the cytoplasm; Function unclear.
    
   0.798
CAZ98473.1
Protein phosphatase with activity toward tyrosine-protein phosphate as well as toward serine-protein phosphate. Features a signal peptide cleaved between the residues 23 and 24. Localized in the periplasm; Specificity unclear.
   
  0.798
CAZ95188.1
Conserved hypothetical membrane protein; Contains five transmembrane helices in the N-terminal region and a central motif reminiscent of the Planctomycetes cytochrome C motif; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
    
 0.781
CAZ94248.1
Conserved hypothetical membrane protein; Contains five transmembrane helices in the N-terminal region; Contains a central motif reminiscent of the Planctomycete cytochrome C motif; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
    
 0.781
CAZ94963.1
Conserved hypothetical membrane protein; Contains four transmembrane helices in the N-terminal region and a central motif reminiscent of the Planctomycete cytochrome C motif; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
    
 0.781
udk
Uridine kinase (pyrimidine ribonucleoside kinase) is the rate-limiting enzyme in the pyrimidine salvage pathway. It catalyzes the reactions: ATP + uridine = ADP + UMP and ATP + cytidine = ADP + CMP. It forms a homotetramer and binds a ATP per subunit as cofactor. Localized in the cytoplasm; High confidence in function and specificity.
   
 0.766
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.