Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ97588.1 | CAZ97590.1 | ZOBELLIA_3450 | ZOBELLIA_3452 | Beta-helix fold protein; Protein that likely adopts a right handed parallel beta-helix fold; Contains a C-terminal PDZ domain responsible of protein-protein interaction by binding either the carboxyl-terminal sequences of proteins or internal peptide sequences suggesting that it could be a signaling protein; Prokaryotic lipoprotein signal peptide cleaved between 19 and 20; Localized in the outer membrane; Conserved hypothetical protein. | Polysaccharide lyase, family PL15; Polysaccharide lyase catalyses the eliminative cleavage of polysaccharides containing uronic acids. Belongs to the family 15 of the polysaccharide lyases. Up to now, the only known activity in family PL15 is oligo-alginate lyase (EC 4.2.2.-). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | 0.708 |
| CAZ97588.1 | CAZ97592.1 | ZOBELLIA_3450 | ZOBELLIA_3454 | Beta-helix fold protein; Protein that likely adopts a right handed parallel beta-helix fold; Contains a C-terminal PDZ domain responsible of protein-protein interaction by binding either the carboxyl-terminal sequences of proteins or internal peptide sequences suggesting that it could be a signaling protein; Prokaryotic lipoprotein signal peptide cleaved between 19 and 20; Localized in the outer membrane; Conserved hypothetical protein. | Acetylesterase that belongs to the lipase-GDSL Pfam family, which includes families 3 and 12 of the carbohydrate esterases (CE3 and CE12); The conserved catalytic residues are Ser31, Asp172 and His175; Signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; Specificity unclear. | 0.482 |
| CAZ97588.1 | CAZ97593.1 | ZOBELLIA_3450 | ZOBELLIA_3455 | Beta-helix fold protein; Protein that likely adopts a right handed parallel beta-helix fold; Contains a C-terminal PDZ domain responsible of protein-protein interaction by binding either the carboxyl-terminal sequences of proteins or internal peptide sequences suggesting that it could be a signaling protein; Prokaryotic lipoprotein signal peptide cleaved between 19 and 20; Localized in the outer membrane; Conserved hypothetical protein. | Sulfatase, family S1-17; The family 1 of sulfatases is composed of enzymes that require the posttranslational oxidation of a conserved cysteine (or serine) to a catalytic formylglycine to hydrolyze various sulfate ester substrates; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 17; Contains a N-terminal transmembrane helix; Possibly localized in the cytoplasmic membrane; Family membership. | 0.593 |
| CAZ97588.1 | CAZ97599.1 | ZOBELLIA_3450 | ZOBELLIA_3461 | Beta-helix fold protein; Protein that likely adopts a right handed parallel beta-helix fold; Contains a C-terminal PDZ domain responsible of protein-protein interaction by binding either the carboxyl-terminal sequences of proteins or internal peptide sequences suggesting that it could be a signaling protein; Prokaryotic lipoprotein signal peptide cleaved between 19 and 20; Localized in the outer membrane; Conserved hypothetical protein. | Sulfatase, family S1-28; The family 1 of sulfatases is composed of enzymes that require the posttranslational oxidation of a conserved cysteine (or serine) to a catalytic formylglycine to hydrolyze various sulfate ester substrates; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 28; Putative lipoprotein with a signal peptide cleaved between the residues 20 and 21; Possibly localized in the outer membrane; Family membership. | 0.744 |
| CAZ97588.1 | CAZ97600.1 | ZOBELLIA_3450 | ZOBELLIA_3462 | Beta-helix fold protein; Protein that likely adopts a right handed parallel beta-helix fold; Contains a C-terminal PDZ domain responsible of protein-protein interaction by binding either the carboxyl-terminal sequences of proteins or internal peptide sequences suggesting that it could be a signaling protein; Prokaryotic lipoprotein signal peptide cleaved between 19 and 20; Localized in the outer membrane; Conserved hypothetical protein. | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 29 and 30; Localized in the periplasmic space; Conserved hypothetical protein. | 0.764 |
| CAZ97590.1 | CAZ97588.1 | ZOBELLIA_3452 | ZOBELLIA_3450 | Polysaccharide lyase, family PL15; Polysaccharide lyase catalyses the eliminative cleavage of polysaccharides containing uronic acids. Belongs to the family 15 of the polysaccharide lyases. Up to now, the only known activity in family PL15 is oligo-alginate lyase (EC 4.2.2.-). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | Beta-helix fold protein; Protein that likely adopts a right handed parallel beta-helix fold; Contains a C-terminal PDZ domain responsible of protein-protein interaction by binding either the carboxyl-terminal sequences of proteins or internal peptide sequences suggesting that it could be a signaling protein; Prokaryotic lipoprotein signal peptide cleaved between 19 and 20; Localized in the outer membrane; Conserved hypothetical protein. | 0.708 |
| CAZ97590.1 | CAZ97591.1 | ZOBELLIA_3452 | ZOBELLIA_3453 | Polysaccharide lyase, family PL15; Polysaccharide lyase catalyses the eliminative cleavage of polysaccharides containing uronic acids. Belongs to the family 15 of the polysaccharide lyases. Up to now, the only known activity in family PL15 is oligo-alginate lyase (EC 4.2.2.-). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | Possible flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases; Contains a signal peptide of lipoprotein cleaved between the residues 21 and 22; Localized in the outer membrane; Family membership. | 0.773 |
| CAZ97590.1 | CAZ97592.1 | ZOBELLIA_3452 | ZOBELLIA_3454 | Polysaccharide lyase, family PL15; Polysaccharide lyase catalyses the eliminative cleavage of polysaccharides containing uronic acids. Belongs to the family 15 of the polysaccharide lyases. Up to now, the only known activity in family PL15 is oligo-alginate lyase (EC 4.2.2.-). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | Acetylesterase that belongs to the lipase-GDSL Pfam family, which includes families 3 and 12 of the carbohydrate esterases (CE3 and CE12); The conserved catalytic residues are Ser31, Asp172 and His175; Signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; Specificity unclear. | 0.911 |
| CAZ97590.1 | CAZ97593.1 | ZOBELLIA_3452 | ZOBELLIA_3455 | Polysaccharide lyase, family PL15; Polysaccharide lyase catalyses the eliminative cleavage of polysaccharides containing uronic acids. Belongs to the family 15 of the polysaccharide lyases. Up to now, the only known activity in family PL15 is oligo-alginate lyase (EC 4.2.2.-). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | Sulfatase, family S1-17; The family 1 of sulfatases is composed of enzymes that require the posttranslational oxidation of a conserved cysteine (or serine) to a catalytic formylglycine to hydrolyze various sulfate ester substrates; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 17; Contains a N-terminal transmembrane helix; Possibly localized in the cytoplasmic membrane; Family membership. | 0.777 |
| CAZ97590.1 | CAZ97594.1 | ZOBELLIA_3452 | ZOBELLIA_3456 | Polysaccharide lyase, family PL15; Polysaccharide lyase catalyses the eliminative cleavage of polysaccharides containing uronic acids. Belongs to the family 15 of the polysaccharide lyases. Up to now, the only known activity in family PL15 is oligo-alginate lyase (EC 4.2.2.-). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 32 and 33; Localized in the periplasmic space; Conserved hypothetical protein. | 0.532 |
| CAZ97590.1 | CAZ97595.1 | ZOBELLIA_3452 | ZOBELLIA_3457 | Polysaccharide lyase, family PL15; Polysaccharide lyase catalyses the eliminative cleavage of polysaccharides containing uronic acids. Belongs to the family 15 of the polysaccharide lyases. Up to now, the only known activity in family PL15 is oligo-alginate lyase (EC 4.2.2.-). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.616 |
| CAZ97590.1 | CAZ97596.1 | ZOBELLIA_3452 | ZOBELLIA_3458 | Polysaccharide lyase, family PL15; Polysaccharide lyase catalyses the eliminative cleavage of polysaccharides containing uronic acids. Belongs to the family 15 of the polysaccharide lyases. Up to now, the only known activity in family PL15 is oligo-alginate lyase (EC 4.2.2.-). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | The Sugars permeases belong to the major facilitator superfamily (MFS) transporters that are single- polypeptide secondary carriers capable only of transporting small solutes (probably sugars in this case) in response to chemiosmotic ion gradients; Contains 12 transmembrane segments; Localized in the cytoplasmic membrane; Family membership. | 0.532 |
| CAZ97590.1 | CAZ97599.1 | ZOBELLIA_3452 | ZOBELLIA_3461 | Polysaccharide lyase, family PL15; Polysaccharide lyase catalyses the eliminative cleavage of polysaccharides containing uronic acids. Belongs to the family 15 of the polysaccharide lyases. Up to now, the only known activity in family PL15 is oligo-alginate lyase (EC 4.2.2.-). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | Sulfatase, family S1-28; The family 1 of sulfatases is composed of enzymes that require the posttranslational oxidation of a conserved cysteine (or serine) to a catalytic formylglycine to hydrolyze various sulfate ester substrates; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 28; Putative lipoprotein with a signal peptide cleaved between the residues 20 and 21; Possibly localized in the outer membrane; Family membership. | 0.468 |
| CAZ97590.1 | CAZ97600.1 | ZOBELLIA_3452 | ZOBELLIA_3462 | Polysaccharide lyase, family PL15; Polysaccharide lyase catalyses the eliminative cleavage of polysaccharides containing uronic acids. Belongs to the family 15 of the polysaccharide lyases. Up to now, the only known activity in family PL15 is oligo-alginate lyase (EC 4.2.2.-). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 29 and 30; Localized in the periplasmic space; Conserved hypothetical protein. | 0.647 |
| CAZ97590.1 | kduI3 | ZOBELLIA_3452 | ZOBELLIA_3459 | Polysaccharide lyase, family PL15; Polysaccharide lyase catalyses the eliminative cleavage of polysaccharides containing uronic acids. Belongs to the family 15 of the polysaccharide lyases. Up to now, the only known activity in family PL15 is oligo-alginate lyase (EC 4.2.2.-). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.502 |
| CAZ97591.1 | CAZ97590.1 | ZOBELLIA_3453 | ZOBELLIA_3452 | Possible flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases; Contains a signal peptide of lipoprotein cleaved between the residues 21 and 22; Localized in the outer membrane; Family membership. | Polysaccharide lyase, family PL15; Polysaccharide lyase catalyses the eliminative cleavage of polysaccharides containing uronic acids. Belongs to the family 15 of the polysaccharide lyases. Up to now, the only known activity in family PL15 is oligo-alginate lyase (EC 4.2.2.-). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear. | 0.773 |
| CAZ97591.1 | CAZ97592.1 | ZOBELLIA_3453 | ZOBELLIA_3454 | Possible flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases; Contains a signal peptide of lipoprotein cleaved between the residues 21 and 22; Localized in the outer membrane; Family membership. | Acetylesterase that belongs to the lipase-GDSL Pfam family, which includes families 3 and 12 of the carbohydrate esterases (CE3 and CE12); The conserved catalytic residues are Ser31, Asp172 and His175; Signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; Specificity unclear. | 0.817 |
| CAZ97591.1 | CAZ97593.1 | ZOBELLIA_3453 | ZOBELLIA_3455 | Possible flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases; Contains a signal peptide of lipoprotein cleaved between the residues 21 and 22; Localized in the outer membrane; Family membership. | Sulfatase, family S1-17; The family 1 of sulfatases is composed of enzymes that require the posttranslational oxidation of a conserved cysteine (or serine) to a catalytic formylglycine to hydrolyze various sulfate ester substrates; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 17; Contains a N-terminal transmembrane helix; Possibly localized in the cytoplasmic membrane; Family membership. | 0.773 |
| CAZ97591.1 | CAZ97594.1 | ZOBELLIA_3453 | ZOBELLIA_3456 | Possible flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases; Contains a signal peptide of lipoprotein cleaved between the residues 21 and 22; Localized in the outer membrane; Family membership. | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 32 and 33; Localized in the periplasmic space; Conserved hypothetical protein. | 0.532 |
| CAZ97591.1 | CAZ97595.1 | ZOBELLIA_3453 | ZOBELLIA_3457 | Possible flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases; Contains a signal peptide of lipoprotein cleaved between the residues 21 and 22; Localized in the outer membrane; Family membership. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.532 |
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