STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97596.1The Sugars permeases belong to the major facilitator superfamily (MFS) transporters that are single- polypeptide secondary carriers capable only of transporting small solutes (probably sugars in this case) in response to chemiosmotic ion gradients; Contains 12 transmembrane segments; Localized in the cytoplasmic membrane; Family membership. (437 aa)    
Predicted Functional Partners:
CAZ97594.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 32 and 33; Localized in the periplasmic space; Conserved hypothetical protein.
       0.773
CAZ97595.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.773
kduI3
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
  
    0.719
kduD2
The 2-keto-3-deoxygluconate oxidoreductase or 2-deoxy-D-gluconate 3-dehydrogenase is involved in the pectin degradation in the pectinolytic microorganisms; Belongs to the short-chain dehydrogenases/reductases (SDR) family, Glucose/ribitol dehydrogenase subfamily; Localized in the cytoplasm; High confidence in function and specificity.
      0.624
CAZ97591.1
Possible flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases; Contains a signal peptide of lipoprotein cleaved between the residues 21 and 22; Localized in the outer membrane; Family membership.
  
    0.565
CAZ97599.1
Sulfatase, family S1-28; The family 1 of sulfatases is composed of enzymes that require the posttranslational oxidation of a conserved cysteine (or serine) to a catalytic formylglycine to hydrolyze various sulfate ester substrates; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 28; Putative lipoprotein with a signal peptide cleaved between the residues 20 and 21; Possibly localized in the outer membrane; Family membership.
       0.538
CAZ97590.1
Polysaccharide lyase, family PL15; Polysaccharide lyase catalyses the eliminative cleavage of polysaccharides containing uronic acids. Belongs to the family 15 of the polysaccharide lyases. Up to now, the only known activity in family PL15 is oligo-alginate lyase (EC 4.2.2.-). Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear.
       0.532
CAZ97592.1
Acetylesterase that belongs to the lipase-GDSL Pfam family, which includes families 3 and 12 of the carbohydrate esterases (CE3 and CE12); The conserved catalytic residues are Ser31, Asp172 and His175; Signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; Specificity unclear.
       0.532
CAZ97593.1
Sulfatase, family S1-17; The family 1 of sulfatases is composed of enzymes that require the posttranslational oxidation of a conserved cysteine (or serine) to a catalytic formylglycine to hydrolyze various sulfate ester substrates; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 17; Contains a N-terminal transmembrane helix; Possibly localized in the cytoplasmic membrane; Family membership.
       0.532
CAZ97600.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 29 and 30; Localized in the periplasmic space; Conserved hypothetical protein.
       0.512
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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