STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97615.1Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 14 and 15; Localized in the outer membrane; Conserved hypothetical protein. (211 aa)    
Predicted Functional Partners:
CAZ97621.1
Stress protein probably induced when the cell is exposed to stress agents or when conditions cause growth arrest; Contains two copies of the universal stress protein (usp) domain; Belongs to the Usp family. Members of the Usp family are predicted to be related to the MADS- box proteins and bind to DNA; Localized in the cytoplasm; Family membership.
 
     0.672
CAZ96975.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.661
CAZ97618.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.651
CAZ97619.1
Mechanosensitive channels provide protection against hypo-osmotic shock, responding both to stretching of the cell membrane and to membrane depolarisation; Contains three transmembrane helices; Belongs to the small-conductance MS channels; Localized in the cytoplasmic membrane; Specificity unclear.
 
     0.611
CAZ97996.1
Conserved hypothetical protein. Localized in the cytoplasm.
  
     0.537
CAZ94740.1
Conserved hypothetical membrane protein; Contains two transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.488
CAZ97616.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.485
CAZ94184.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 18 and 20; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.482
CAZ97570.1
The outer membrane efflux proteins (OEP) are composed of two repeats of OEP domain to form a trimeric channel continuous, solvent-accessible conduit that spans both the outer membrane and periplasmic space; May be specialized for the signal peptide independent extracellular secretion of a variety of substrates in Gram-negative bacteria (type I secretion system); Signal peptide cleaved between the residues 19 and 20; Localized in the outer membrane; Family membership.
  
     0.456
CAZ97575.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (21-95) and the Plug module (109-215) acting as a channel gate; The signal peptide is cleaved between the residues 20 and 21; Family membership.
  
     0.449
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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