STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97709.1SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 21 and 22; Putatively localized in the outer membrane; Family membership. (588 aa)    
Predicted Functional Partners:
CAZ97708.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules (here, possibly oligoagaroses) that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-104) and the Plug module (120-227) acting as a channel gate; The signal peptide is cleaved between the residues 28 and 29; Family membership.
 
     0.905
CAZ97761.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space; Conserved hypothetical protein.
  
 
   0.790
CAZ97775.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules (here, possibly oligoagarose) that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-104) and the Plug module (120-228) acting as a channel gate; The signal peptide is cleaved between the residues 29 and 30; Family membership.
  
 
   0.789
CAZ96460.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (37-110) and the Plug module (126-232) acting as a channel gate; The signal peptide is cleaved between the residues 33 and 34; Family membership.
 
 
   0.788
CAZ96453.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules (here, possibly sugars) that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (30-104) and the Plug module (120-227) acting as a channel gate; The signal peptide is cleaved between the residues 24 and 25; Family membership.
  
     0.766
CAZ97439.1
Probably a cytoplasmic protein.
  
   0.751
CAZ97719.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (58-131) and the Plug module (147-263) acting as a channel gate; The signal peptide is cleaved between the residues 38 and 39; Family membership.
 
 
   0.735
CAZ97762.1
Conserved hypothetical protein; This protein displays distant similarity with glycoside hydrolases of the family 74 (GH74). These proteins consist of a tandem repeat of two similar domains, which are both folded into seven-bladed beta- propeller structures. But the two conserved catalytic aspartatic residues are substituted here by two asparagine residues. Features a signal peptide cleaved between the residues 19 and 20.
  
    0.726
CAZ94278.1
Conserved hypothetical protein; Contains a C-terminal domain of unknown function (100 aa) and a lipoprotein signal peptide cleaved between the residues 16 and 17; Localized in the outer membrane; Belongs to the glycosyl hydrolase 43 family.
  
     0.723
CAZ97765.1
This enzyme belongs to the family 74 of the glycoside hydrolases. These proteins consist of a tandem repeat of two similar domains, which are both folded into seven-bladed beta-propeller structures. The conserved catalytic residues are Asp70 and Asp 549. Features a signal peptide cleaved between the residues 24 and 25; Specificity unclear.
  
    0.722
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.