STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97728.1Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 17 and 18; Localized in the periplasmic space; Conserved hypothetical protein. (120 aa)    
Predicted Functional Partners:
CAZ95252.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.700
CAZ97727.1
Conserved protein belonging to the GreA family of the transcription elongation factors. Localized in the cytoplasm; Specificity unclear.
       0.662
CAZ94166.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.608
CAZ96959.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 28 and 29; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.603
CAZ95503.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.571
CAZ96733.1
Conserved hypothetical lipoprotein; Signal peptide of lipoprotein cleaved between the residues 19 and 20; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.547
CAZ97137.1
Dolichol-phosphate mannose synthase, family GT2; Modular protein with a N-terminal response regulator receiver domain and a C-terminal dolichol- phosphate mannose synthase. Response regulator proteins are involved in the two-component signal transduction systems to detect and respond to environmental changes. The response regulator receiver domain is substrate for a histidine protein kinase sensor. Instead of a transcriptional regulator, the C-terminal effector domain is here a dolichol-phosphate mannose synthase. This enzyme belongs to the family 2 of the glycosyltransferase. It catal [...]
  
     0.533
CAZ97495.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Gene very often associated with a gene encoding for a TonB-dependent receptor or transducer; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic membrane; Family membership.
  
     0.518
CAZ97135.1
Conserved hypothetical membrane protein; Protein distantly related to the protein Wzx from E. coli which is involved in O-antigen biosynthesis; Contains ten transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.499
CAZ97725.1
The sensor histidine kinase belongs to two-component signal transduction systems. It catalyzes the ATP dependent autophosphorylation of a conserved histidine in its phosphoacceptor domain and the signal dependent phosphorylation of a conserved aspartic acid present in the response regulator receiver domain; Possibly localized in the cytoplasm; Family membership.
 
     0.493
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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