STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97736.1Conserved hypothetical lipoprotein; Contains a putative lipoprotein signal peptide cleaved betweenthe residues 18 and 19; Possibly localized in the outer membrane; Conserved hypothetical protein. (384 aa)    
Predicted Functional Partners:
CAZ97737.1
Glycoside hydrolase, family GH2; Modular enzyme with a N-terminal beta-galactosidase domain (belongs to the family 2 of glycoside hydrolases, TIM alpha/beta barrel fold) and two C-terminal fibronectin type III domain (FN3); Seems to have a signal peptide cleaved between the residues 20 and 21; Putatively localized in the periplasmic space; Family membership.
 
    0.798
CAZ97742.1
Possible FAD dependent oxidoreductase; Contains a N-terminal flavoprotein domain (20 to 426); Belongs to the FAD/NAD(P)-binding Rossmann fold Superfamily, pyridine nucleotide-disulfide oxidoreductase family; Localized in the cytoplasm; Family membership.
 
     0.785
CAZ97762.1
Conserved hypothetical protein; This protein displays distant similarity with glycoside hydrolases of the family 74 (GH74). These proteins consist of a tandem repeat of two similar domains, which are both folded into seven-bladed beta- propeller structures. But the two conserved catalytic aspartatic residues are substituted here by two asparagine residues. Features a signal peptide cleaved between the residues 19 and 20.
 
     0.759
CAZ97753.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.757
porD
Beta-porphyranase D, family GH16; Cleaves the sulfated polysaccharide porphyran at the (1->4) linkages between beta-D-galactopyranose and alpha-L-galactopyranose-6- sulfate, forming mostly the disaccharide alpha-L-galactopyranose-6- sulfate-(1->3)-beta-D-galactose.
 
     0.754
CAZ97735.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 22 and 23; Localized in the outer membrane; Conserved hypothetical protein.
    
0.741
porE
Beta-porphyranase E, family GH16; Cleaves the sulfated polysaccharide porphyran at the (1->4) linkages between beta-D-galactopyranose and alpha-L-galactopyranose-6- sulfate, forming mostly the disaccharide alpha-L-galactopyranose-6- sulfate-(1->3)-beta-D-galactose.
 
     0.740
CAZ98223.1
Hypothetical periplasmic protein; Contains a C-terminal stress responsive alpha-beta barrel domain; Signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Hypothetical protein.
  
     0.736
CAZ97478.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.726
porB
Beta-porphyranase B, family GH16; Cleaves the sulfated polysaccharide porphyran at the (1->4) linkages between beta-D-galactopyranose and alpha-L-galactopyranose-6- sulfate, forming mostly the disaccharide alpha-L-galactopyranose-6- sulfate-(1->3)-beta-D-galactose. Some longer oligosaccharides of even number of residues are also observed. Inactive on the non-sulfated agarose portion of the porphyran backbone. In contrast to PorA, tolerates the presence of 3-6-anhydro-L-galactose in subsite -2.
 
     0.722
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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