Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ97745.1 | CAZ97746.1 | ZOBELLIA_3607 | ZOBELLIA_3608 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (22-95) and the Plug module (111-220) acting as a channel gate; The signal peptide is cleaved between the residues 20 and 21; Family membership. | Putative protein. | 0.418 |
| CAZ97745.1 | CAZ97747.1 | ZOBELLIA_3607 | ZOBELLIA_3609 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (22-95) and the Plug module (111-220) acting as a channel gate; The signal peptide is cleaved between the residues 20 and 21; Family membership. | Transcriptional regulator involved in the repression and/or the positive regulation of genes encoding for enzymes; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcriptional regulators, involved in the binding of the protein to the operator sequences in the DNA. At the C-terminus there is an effector- binding/oligomerisation domain; Localized in the cytoplasm; Family membership. | 0.543 |
| CAZ97746.1 | CAZ97745.1 | ZOBELLIA_3608 | ZOBELLIA_3607 | Putative protein. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (22-95) and the Plug module (111-220) acting as a channel gate; The signal peptide is cleaved between the residues 20 and 21; Family membership. | 0.418 |
| CAZ97746.1 | CAZ97747.1 | ZOBELLIA_3608 | ZOBELLIA_3609 | Putative protein. | Transcriptional regulator involved in the repression and/or the positive regulation of genes encoding for enzymes; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcriptional regulators, involved in the binding of the protein to the operator sequences in the DNA. At the C-terminus there is an effector- binding/oligomerisation domain; Localized in the cytoplasm; Family membership. | 0.569 |
| CAZ97747.1 | CAZ97745.1 | ZOBELLIA_3609 | ZOBELLIA_3607 | Transcriptional regulator involved in the repression and/or the positive regulation of genes encoding for enzymes; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcriptional regulators, involved in the binding of the protein to the operator sequences in the DNA. At the C-terminus there is an effector- binding/oligomerisation domain; Localized in the cytoplasm; Family membership. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (22-95) and the Plug module (111-220) acting as a channel gate; The signal peptide is cleaved between the residues 20 and 21; Family membership. | 0.543 |
| CAZ97747.1 | CAZ97746.1 | ZOBELLIA_3609 | ZOBELLIA_3608 | Transcriptional regulator involved in the repression and/or the positive regulation of genes encoding for enzymes; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcriptional regulators, involved in the binding of the protein to the operator sequences in the DNA. At the C-terminus there is an effector- binding/oligomerisation domain; Localized in the cytoplasm; Family membership. | Putative protein. | 0.569 |