Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CAZ94439.1Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols; Signal peptide of lipoprotein cleaved between the residues 15 and 16; Localized in the outer membrane; High confidence in function and specificity. (260 aa)    
Predicted Functional Partners:
lamB
Endo-1,3-beta-glucanase, family GH16; Endo-1,3-beta-glucanase (Laminarinase) hydrolyzes the 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans. Belongs to the family 16 of glycoside hydrolases (GH16). Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 22 and 23; Localized in the cytoplasmic membrane; High confidence in function and specificity.
      0.952
lacZ
Beta-galactosidase, family GH2; Enzyme that catalyzes the hydrolysis of the beta- 1, 4 linkage at the terminal non-reducing of beta-D-galactosides, releasing a beta-D-galactose residue; Belongs to the family 2 of glycoside hydrolases (GH2); Signal peptide cleaved between residues 28 and 29; Possibly localized in the outer membrane; High confidence in function and specificity.
 
 
    0.805
lamA
Endo-1,3-beta-glucanase, family GH16; Endo-1,3-beta-glucanase (Laminarinase) hydrolyzes the 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans. This laminarinase is a modular protein with a N-terminal PKD domain and a C-terminal catalytic module of the family 16 of glycoside hydrolases (GH16). Features a signal peptide of lipoprotein putatively cleaved between the residues 30 and 31; Localized in the outer membrane; High confidence in function and specificity.
 
      0.803
lamC
Endo-1,3-beta-glucanase, family GH16; Endo-1,3-beta-glucanase (Laminarinase) hydrolyzes the 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans. This laminarinase is a modular protein with a N-terminal catalytic module of the family 16 of glycoside hydrolases (GH16), a central carbohydrate binding module of the family 6 (CBM6) and a C-terminal conserved domain of unknown function. Features a signal peptide cleaved between the residues 22 and 23; High confidence in function and specificity.
 
      0.759
CAZ94437.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (31-104) and the Plug module (120-230) acting as a channel gate; The signal peptide is cleaved between the residues 27 and 28; Family membership.
 
     0.748
CAZ94438.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding. This sequence corresponds to the N-terminal domain found in the proteins belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 25 and 26; Probably localized in the outer membrane; Family membership.
 
     0.746
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.613
aqpZ
Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.400
glpF
Glycerol enters the cell via the glycerol diffusion facilitator protein. This membrane protein facilitates the movement of glycerol across the cytoplasmic membrane. Belongs to the Major Intrinsinc Protein family which also includes aquaporin. Features six transmembrane helices. Localized in the cytoplasmic membrane; High confidence in function and specificity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.400
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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