STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ampGProtein AmpG is a signal transducer in beta-lactamase induction. It probably acts as a permease in the beta-lactamase induction system and in peptidoglycan recycling. Belongs to the major facilitator superfamily. Features twelve transmembrane helices. Localized in the cytoplasmic membrane; High confidence in function and specificity. (424 aa)    
Predicted Functional Partners:
CAZ97858.1
Beta-N-acetylglucosaminidase, family GH3; Beta-N-acetylglucosaminidase catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-beta-D-glucosaminides. It belongs to the family 3 of the glycoside hydrolases; High confidence in function and specificity.
     
 0.787
CAZ97857.1
UPF0075 family protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
     
 0.784
CAZ95921.1
Conserved protein belonging to the DUF1460 family. Features a signal peptide cleaved between the residues 19 and 20. Localized in the periplasm; Family membership.
  
     0.722
CAZ97856.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
       0.601
CAZ97855.1
Sodium/solute symporter; Sodium/substrate symport is a widespread mechanism of solute transport across cytoplasmic membranes of cells. Thereby the energy stored in an inwardly directed electrochemical sodium gradient (sodium motive force, SMF) is used to drive solute accumulation against a concentration gradient; Contains thirteen transmembrane helices; Localized in the cytoplasmic membrane; Family membership; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.557
CAZ98306.1
Amidase catalyzes the reaction: a monocarboxylic acid amide + H2O = a monocarboxylate + NH3. The specificity of this enzyme is unknown. Belongs to a protein family including N-acetylmuramoyl-L-alanine amidase. Features an uncleaved signal peptide. Localized in the cytoplasmic membrane; Specificity unclear.
 
   
 0.538
nagB2
Bifunctional enzyme with a N-terminal glucosamine-6-phosphate (GlcN6P) deaminase domain and a C-terminal deacetylase domain. GlcN6P deaminase catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate to form fructose 6-phosphate and ammonium ion in the N-acetylglucosamine utilization pathway. Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. The C-terminal domain belongs to the PIG-L family, which includes various deacetylases, such as the mammalian and yeast N-acetylglucosaminylphosphatidylinositol de-N-acetylase and the diacetylchitobiose deac [...]
     
 0.475
CAZ95404.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.432
CAZ97992.1
These membrane fusion proteins (MFP) belong to a multidrug efflux pump system that confer the resistance to compounds such as antibiotics, solvents or heavy metals; Proteins of the MFP family function as 'adaptors', connecting a ABC transporters, localized in the cytoplasmic membrane, with a porin or channel localized in outer membrane; The MFP proteins seem to be anchored in the cytoplasmique membrane by a N-terminal transmembrane region; Belongs to the type I secretion system; Family membership.
 
 
 0.420
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.