STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97877.1Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; Conserved hypothetical protein. (913 aa)    
Predicted Functional Partners:
CAZ98195.1
Conserved hypothetical membrane protein; Contains fourteen transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.763
CAZ96913.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Conserved hypothetical protein.
  
   
 0.732
CAZ94829.1
Bacterial surface antigen; Conserved protein belonging to the bacterial surface antigen family; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 25 and 26; Localized in the outer membrane; Function unclear.
  
  
 0.728
CAZ95479.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.713
CAZ97848.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
  
    0.687
CAZ96608.1
This membrane protein seems involved in the insertion of outer membrane proteins. It has two domains. The C-terminal part, a beta-barrel pore-forming region inserted in the outer membrane, is a Bacterial surface antigen (D15) domain. The N-terminal part, exposed in the periplasm, and involved in gating of the pore and binding of the substrate proteins consists of four Surface antigen variable number repeats; Belongs to the surface antigen D15 family; Signal peptide cleaved between the residues 24 and 25; Localized in the outer membrane; Family membership.
  
  
 0.683
CAZ97876.1
Endoribonuclease active on single-stranded mRNA. Inhibits protein synthesis by cleavage of mRNA. Belongs to the ribonuclease L-PSP family. This family includes the rat liver perchloric acid-soluble protein (L-PSP), which has been shown to be a ribonuclease, and the protein yabJ from Bacillus subtilis involved in the regulation of the purine biosynthetic gene purA. Localized in the cytoplasm; Family membership.
       0.672
surA
Peptidyl-prolyl isomerase catalyzes the cis-trans isomerization of proline residues. Also known as chaperone, SurA is involved in the correct folding and assembly of outer membrane proteins such as ompA, ompF and lamB recognizing specific patterns of aromatic residues and the orientation of their side chains. It May act in both early periplasmic and late outer membrane-associated steps of protein maturation. Essential for the survival of bacteria in stationary phase; Signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; High confidence in function a [...]
 
  
 0.661
CAZ96508.1
Contains 13 transmembrane segments; Integral cytoplasmic membrane protein; Conserved hypothetical protein.
  
     0.654
CAZ95553.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.647
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.