STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97879.1Protein of unknown function that could be the periplasmic component of a ABC transporter (importer); Contains a Mce (mammalian cell entry) domain and one N-terminal transmembrane segment; Localized in the cytoplasmic membrane; Conserved hypothetical protein. (326 aa)    
Predicted Functional Partners:
CAZ94945.1
ABC transporter, permease component; ABC (ATP-binding cassette) transporters are responsible for translocation of a variety of compounds across biological membranes; Probably, this protein is the membrane component of an ABC importer; Contains a DUF140 domain and five transmembrane segments; Localized in the cytoplasmic membrane; Family membership.
 
 0.991
CAZ98021.1
ABC importer, permease component; ABC (ATP-binding cassette) membrane protein responsible for translocation of a variety of compounds across biological membranes. Possibly involved in uptake of organic solvents such as gamma-Hexachlorocyclohexane or toluene for their utilization as source of carbon; Contains five transmembrane segments; Localized in the cytoplasmic membrane; Specificity unclear; Belongs to the MlaE permease family.
 
 0.979
CAZ94946.1
ABC transporter, ATPase component; This protein is the nucleotide-binding domain of the ABC transporters (ABC ATPase); Responsible for coupling the energy of ATP hydrolysis to conformational changes in the permease component (ABC membrane); Localized in the cytoplasmic membrane as a peripheral membrane protein; Family membership.
 
 0.973
CAZ98020.1
ABC importer, ATPase component; This protein is the nucleotide-binding domain of the ABC transporters (ABC ATPase); Responsible for coupling the energy of ATP hydrolysis to conformational changes in the permease component (ABC membrane); Localized in the cytoplasmic membrane as a peripheral membrane protein; Family membership.
 
 0.959
CAZ98019.1
ABC importer, periplasmic component; Periplasmic protein of unknown function anchored in the cytoplasmic membrane by a N-terminal transmembrane segment; could be involved in the uptake of organic solvents; Contains a Mce (mammalian cell entry) domain; Belongs to the periplasmic substrate-binding ABC transporter superfamily; Specificity unclear.
  
  
 
0.909
CAZ97880.1
Membrane protein that could be the permease component of an ABC transporter (importer); Contains six N-terminal transmembrane segments; Localized in the cytoplasmic membrane; Specificity unclear.
       0.820
amiA
N-acetylmuramoyl-L-alanine amidase; The protein contains two domains. A N-terminal N-acetylmuramoyl-L-alanine amidase domain (230 residues) that hydrolyzes the amide bond between N-acetylmuramoyl residues and L-amino acid residues in bacterial cell walls and a C-terminal domain (200 residues) of unknown function; Contains one N-terminal transmembrane segment; Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family; Localized in the cytoplasmic membrane; High confidence in function and specificity.
 
     0.709
CAZ97881.1
Protein that could be an oxidoreductase; Contains two cysteine-rich regions (CCG domains); Localized in the cytoplasm; Specificity unclear.
       0.700
CAZ96608.1
This membrane protein seems involved in the insertion of outer membrane proteins. It has two domains. The C-terminal part, a beta-barrel pore-forming region inserted in the outer membrane, is a Bacterial surface antigen (D15) domain. The N-terminal part, exposed in the periplasm, and involved in gating of the pore and binding of the substrate proteins consists of four Surface antigen variable number repeats; Belongs to the surface antigen D15 family; Signal peptide cleaved between the residues 24 and 25; Localized in the outer membrane; Family membership.
 
    0.634
CAZ97882.1
Possible ABC importer, ATPase component; Conserved hypothetical protein that could be an ATP-binding protein; Localized in the cytoplasm; Conserved hypothetical protein.
       0.617
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.