STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97914.1Hypothetical membrane protein; Contains one N-terminal transmembrane segment; Localized in the cytoplasmic membrane; Hypothetical protein. (300 aa)    
Predicted Functional Partners:
algI2
Poly(beta-D-mannuronate) O-acetylase, involved in glycan biosynthesis, forms an cytoplasmic membrane complex which probably interacts with a beta-D-mannuronate polymerization-transport complex and adds acetyl groups at the O-2 and O-3 positions of polymannuronic acid; Contains 8 transmembrane segments; Belongs to the MBOAT (membrane-bound acyltransferase) family; Localized in the cytoplasmic membrane; Specificity unclear.
       0.782
lpsL
UDP-glucuronate 4-epimerase converts the UDP-glucuronate to UDP-D-galacturonate. LpsL is involved in lipopolysaccharide biosynthesis; Belongs to the NAD dependent epimerase/dehydratase family, Rossmann fold Superfamily; Localized in the cytoplasmic membrane; High confidence in function and specificity.
       0.508
ugdH
UDP-glucose 6-dehydrogenase catalyzes the oxidation of UDP-glucose to UDP-glucuronate. Likely involves in EPS biosynthesis. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family, a small group of enzymes which possesses the ability to catalyze the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate; Localized in the cytoplasm; High confidence in function and specificity.
       0.508
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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