STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhB2Quinoprotein glucose dehydrogenase; The mature protein is a multidomain protein: The first 430 residues would be The signal peptide is cleaved between the residues 26 and 27; Protein probably localized in the outer membrane; Hypothetical protein. (2039 aa)    
Predicted Functional Partners:
CAZ98087.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
     0.896
CAZ94566.1
TatD family protein; Conserved protein belonging to the TatD family. These enzymes adopt a TIM barrel fold; Localized in the cytoplasm; Family membership.
 
     0.730
CAZ95962.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.725
CAZ96054.1
Conserved hypothetical protein; Contains a domain of unknown function DUF354. This family mainly contains proteins from Archae; Localized in the cytoplasm.
  
     0.723
CAZ95919.1
Conserved hypothetical protein; The protein contains seven Fibronectin type 3 domains in its N-terminal part (42 to 713). No similarity with a known protein from the data bank was found with the 200 C-terminal residues; Signal peptide cleaved between the residues 23 and 24; Possible Lipoprotein localized in the outer membrane; Function unclear.
     0.721
CAZ94562.1
Type I phosphodiesterase catalyzes the cleavage of phosphodiester and phosphosulfate bonds in various substrates such as NAD, deoxynucleotides and nucleotide sugars. The exact specificity of this enzyme is not known; Localized in the cytoplasm; Family membership.
 
     0.711
CAZ96636.1
Conserved hypothetical protein; Signal peptide cleaved between the residues 28 and 29; Possibly localized in the outer membrane.
  
     0.669
CAZ94567.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.668
CAZ94565.1
Conserved protein belonging to the UbiA prenyltransferase family, which includes various prenyltransferases, but also cytochrome C oxidase assembly factor. The exact function of this protein is unclear; Contains nine transmembrane helices. Localized in the cytoplasmic membrane; Family membership.
 
     0.666
CAZ97042.1
Conserved hypothetical protein; Contains several Single hybrid motifs found in biotinyl/lipoyl-carrier proteins and domains, where the biotin and lipoic acid moieties act as covalently attached coenzyme in various enzymes; Signal peptide cleaved between the residues 23 and 24; Putatively localized in the cytoplasmic membrane.
  
     0.657
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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