Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ97926.1 | CAZ97927.1 | ZOBELLIA_3788 | ZOBELLIA_3789 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (21-97) and the Plug module (109-219) acting as a channel gate; The signal peptide is cleaved between the residues 19 and 20; Family membership. | Conserved hypothetical protein. Localized in the cytoplasm. | 0.522 |
| CAZ97926.1 | capC | ZOBELLIA_3788 | ZOBELLIA_3787 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (21-97) and the Plug module (109-219) acting as a channel gate; The signal peptide is cleaved between the residues 19 and 20; Family membership. | Tyrosine-protein phosphatase; Dephosphorylates the phosphotyrosine-containing proteins required for the biosynthesis of type 1 capsular polysaccharide; Involved in the capsular polysaccharide (CPS) biosynthesis; Uses the mamganese as cofactor; Contains a polymerase and histidinol Phosphatase domain (PHP domain; Localized in the cytoplasm; High confidence in function and specificity. | 0.447 |
| CAZ97927.1 | CAZ97926.1 | ZOBELLIA_3789 | ZOBELLIA_3788 | Conserved hypothetical protein. Localized in the cytoplasm. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (21-97) and the Plug module (109-219) acting as a channel gate; The signal peptide is cleaved between the residues 19 and 20; Family membership. | 0.522 |
| capC | CAZ97926.1 | ZOBELLIA_3787 | ZOBELLIA_3788 | Tyrosine-protein phosphatase; Dephosphorylates the phosphotyrosine-containing proteins required for the biosynthesis of type 1 capsular polysaccharide; Involved in the capsular polysaccharide (CPS) biosynthesis; Uses the mamganese as cofactor; Contains a polymerase and histidinol Phosphatase domain (PHP domain; Localized in the cytoplasm; High confidence in function and specificity. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (21-97) and the Plug module (109-219) acting as a channel gate; The signal peptide is cleaved between the residues 19 and 20; Family membership. | 0.447 |