STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94454.1Conserved hypothetical protein; Localized in the cytoplasm. (185 aa)    
Predicted Functional Partners:
CAZ97197.1
Transposase, family 11; The transposases are encoded by mobile genetic elements such as transposon or insertion sequences (IS). Transposases catalyze the transposition, by site-specific DNA recombination, of these autonomous mobile genetic elements. The catalytic activity of this enzyme family involves DNA cleavage followed by a strand transfer reaction; Belongs to family 11 of transposases; Localized in the cytoplasm; Family membership.
 
      0.511
CAZ96806.1
The alpha/beta hydrolase-fold proteins catalyse a wide range of enzymatic reactions. They are characterized by a catalytic triad, usually an serine, an aspartic acid, and an histidine; The core of enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices; Belongs to alpha/beta hydrolase superfamily; Localized in the cytoplasm; Function unclear.
  
     0.495
CAZ94452.1
Putative protein.
       0.487
CAZ94453.1
Hypothetical protein; Putatively localized in the cytoplasm.
       0.487
CAZ94455.1
Conserved hypothetical protein; Protein fragment found in proteins annotated as transposases; Localized in the cytoplasm.
       0.476
CAZ94183.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 29 and 30; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.442
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.