STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ97974.1Conserved protein containing a N-terminal cyclic nucleotide-binding domain, a central CBS domain and a C-terminal DUF294 family domain. The cyclic nucleotide-binding domains are composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. CBS (cystathionine-beta-synthase) domains are small intracellular modules that pair together to form a stable globular domain. They bind ligands with an adenosyl group such as AMP, ATP and S-AdoMet and may play a regulatory role making proteins sensitive to adenosyl carrying ligands. DUF294 family proteins are [...] (641 aa)    
Predicted Functional Partners:
dnaQ
The epsilon subunit of DNA polymerase III is responsible of the proofreading 3'-5' exonuclease activity; The DNA polymerase III or replicase is responsible for most of the replicative synthesis in bacteria. It exhibits a DNA polymerase activity (alpha chain) and a 3' to 5' exonuclease proofreading activity; Localized in the cytoplasm; High confidence in function and specificity.
 
    0.952
CAZ97855.1
Sodium/solute symporter; Sodium/substrate symport is a widespread mechanism of solute transport across cytoplasmic membranes of cells. Thereby the energy stored in an inwardly directed electrochemical sodium gradient (sodium motive force, SMF) is used to drive solute accumulation against a concentration gradient; Contains thirteen transmembrane helices; Localized in the cytoplasmic membrane; Family membership; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.757
CAZ97856.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.654
CAZ97976.1
Putative protein.
       0.570
CAZ97975.1
Conserved protein belonging to the DUF893 family; Contains nine transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
       0.433
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
 0.411
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
Server load: medium (60%) [HD]