STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98023.1Chloride channels constitute an evolutionarily well-conserved family of voltage-gated channels that are structurally unrelated to the other known voltage-gated channels. Features eleven transmembrane helices. Localized in the cytoplasmic membrane; High confidence in function and specificity. (443 aa)    
Predicted Functional Partners:
CAZ98022.1
Peptide that consists of a putative transmembrane helix possibly localized in the cytoplasmic membrane; Hypothetical protein.
       0.560
CAZ98019.1
ABC importer, periplasmic component; Periplasmic protein of unknown function anchored in the cytoplasmic membrane by a N-terminal transmembrane segment; could be involved in the uptake of organic solvents; Contains a Mce (mammalian cell entry) domain; Belongs to the periplasmic substrate-binding ABC transporter superfamily; Specificity unclear.
     
 0.467
CAZ98020.1
ABC importer, ATPase component; This protein is the nucleotide-binding domain of the ABC transporters (ABC ATPase); Responsible for coupling the energy of ATP hydrolysis to conformational changes in the permease component (ABC membrane); Localized in the cytoplasmic membrane as a peripheral membrane protein; Family membership.
       0.461
CAZ98021.1
ABC importer, permease component; ABC (ATP-binding cassette) membrane protein responsible for translocation of a variety of compounds across biological membranes. Possibly involved in uptake of organic solvents such as gamma-Hexachlorocyclohexane or toluene for their utilization as source of carbon; Contains five transmembrane segments; Localized in the cytoplasmic membrane; Specificity unclear; Belongs to the MlaE permease family.
       0.461
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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