STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98046.1Conserved hypothetical lipoprotein; This Protein likely adopts a beta-propeller fold; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 21 and 22; Localized in the outer membrane; Conserved hypothetical protein. (430 aa)    
Predicted Functional Partners:
CAZ98045.1
Protein that contains two type-III fibronectin (FN3) domains. Structures of individual FN3 domains have revealed a conserved beta sandwich fold found in glycoside hydrolases and other proteins; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 18 and 19; Localized in the cytoplamic membrane; Family membership.
       0.775
CAZ98043.1
Hypothetical membrane protein; Contains a putative lipoprotein signal peptide cleaved between the residues 17 and 18; Possibly localized in the outer membrane; Hypothetical protein.
       0.773
CAZ98044.1
Extracellular metallopeptidase, family M4; This peptidase belongs to the family 4 of the metallopeptidases, which also contains thermolysin and related neutral peptidases. The conserved catalytic motif is HEXXE, in which the histidines are zinc ligands and the glutamate is a catalytic residue. The zinc ion is also bound by a second glutamate, 20-33 residues C-terminal to the HEXXH motif, and by an activated water molecule which forms the nucleophile in catalysis. Features a large C-terminal region of unknown function (621-1307), which includes a TSP3 calcium-binding domain. Features a [...]
       0.773
CAZ98042.1
Putative protein.
       0.561
CAZ98040.1
Response regulator proteins are involved in the two-component signal transduction systems to detect and respond to environmental changes. These proteins consist of two domains, an N-terminal response regulator receiver domain that is substrate for a histidine protein kinase sensor, and a variable C-terminal effector domain with DNA- binding activity (here, a LuxR-type HTH domain) that acts as transcriptional regulator; Family membership.
  
    0.545
CAZ98041.1
The sensor histidine kinase belongs to two-component signal transduction systems. It catalyzes the ATP dependent autophosphorylation of a conserved histidine in its phosphoacceptor domain and the signal dependent phosphorylation of a conserved aspartic acid present in the response regulator receiver domain; Signal peptide cleaved between the residues 20 and 21; Contains four N- terminal tetratrico peptide repeats (TPR); Localized in the cytoplasmic membrane; Family membership.
  
    0.545
CAZ96427.1
O-linked N-acetylglucosaminyltransferase, family GT41; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide. Contains Tetratricopeptide repeats; Seems to have an uncleavable N-terminal signal sequence; Localized in the cytoplasmic membrane; Specificity unclear.
  
    0.481
CAZ95499.1
Patatin-like phospholipase; Conserved protein containing a N-terminal Patatin-like phospholipase domain and a C-terminal domain of unknown function; Contains a signal peptide cleaved between the residues 32 and 33; Localized in the periplasmic space; Family membership.
  
 
 0.406
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.