STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98105.1Conserved hypothetical protein; Localized in the cytoplasm. (106 aa)    
Predicted Functional Partners:
CAZ95334.1
Conserved protein belonging to the DUF1271 family. Members of this family contain three highly conserved cysteine residues. The function of this family is unknown. Localized in the cytoplasm; Family membership.
 
  
 0.845
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.732
CAZ98103.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.689
CAZ96759.1
CsbD-like protein; CsbD is a bacterial general stress response protein. Its expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear. Localized in the cytoplasm; Function unclear; Belongs to the UPF0337 (CsbD) family.
  
    0.550
CAZ96969.1
Conserved protein belonging to the NAD(P)-dependent epimerase/dehydratase family. Adopts a Rossmann fold. Localized in the cytoplasm; Function unclear.
  
    0.547
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
    0.508
CAZ98102.1
YbeD-like Protein; YbeD adopts a alpha/beta fold with two alpha-helices on one side of a four-strand antiparallel beta-sheet. The beta-sheet surface contains a patch of conserved hydrophobic residues, suggesting a role in protein-protein interactions. YbeD shows striking structural homology to the regulatory domain from D-3- phosphoglycerate dehydrogenase, hinting at a role in the allosteric regulation of lipoic acid biosynthesis or the glycine cleavage system. Localized in the cytoplasm; Conserved hypothetical protein.
       0.499
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.