STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98116.1Mechanosensitive channels provide protection against hypo-osmotic shock, responding both to stretching of the cell membrane and to membrane depolarisation; Contains three transmembrane helices; Belongs to the small-conductance MS channels; Localized in the cytoplasmic membrane; Family membership. (181 aa)    
Predicted Functional Partners:
CAZ98117.1
Conserved hypothetical membrane protein; Contains a putative lipoprotein signal peptide cleaved between the residues 23 and 24; Possibly localized in the outer membrane; Conserved hypothetical protein.
       0.782
CAZ98118.1
Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.682
CAZ98120.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.671
kdsC
3-Deoxy-D-manno-octulosonate 8-phosphate phosphatase; KdsC is involved in lipolysaccharides (LPS) biosynthesis. It catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate; Binds one magnesium as cofactor; Localized in the cytoplasm; High confidence in function and specificity.
       0.663
CAZ95548.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.562
CAZ98193.1
Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.544
CAZ98115.1
Carbohydrate esterase, family CE14; Carbohydrate esterases catalyze the de-O or de-N-acetylation of substituted saccharides; Belongs to the family 14 of the carbohydrate esterases (CE14); Signal peptide cleaved between residues 20and 21; Localized in the periplasmic space; Specificity unclear.
       0.516
CAZ95806.1
Conserved hypothetical membrane protein; Contains one transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.469
CAZ95988.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.457
CAZ95470.1
Esterase adopting an alpha/beta hydrolase fold. Its exact specificity is unknown; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Specificity unclear.
  
     0.412
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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