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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94077.1Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplamic space; Conserved hypothetical protein. (209 aa)    
Predicted Functional Partners:
CAZ94698.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.772
CAZ96490.1
Hypothetical membrane protein; Signal peptide cleaved betwenn the residues 19 and 20; Possibly localized in the outer membrane; Hypothetical protein.
  
     0.767
CAZ94697.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 16 and 17; Localized in the cytoplasmic and/or outer membrane; Conserved hypothetical protein.
  
     0.764
CAZ96483.1
This enzyme belongs to the family 2 of the aspartic peptidases. An activated water molecule is the nucleophile these peptidases and is bound by two aspartic residues, one from each monomer of the homo-dimeric molecule. Localized in the cytoplasm; Specificity unclear.
  
     0.762
CAZ97281.1
Conserved hypothetical protein; Localized in cytoplasm.
  
     0.759
CAZ97872.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.759
CAZ96885.1
Possible TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; The signal peptide is cleaved between the residues 21 and 22; Family membership.
  
     0.756
CAZ95365.1
Conserved hypothetical membrane protein; Contains six transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.753
CAZ95807.1
Conserved hypothetical membrane protein; Contains eight transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.753
CAZ95548.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
    0.750
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.