STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98159.1Conserved hypothetical protein; Seems to contains a C-terminal OB motif involved in the oligonucleotide/oligosaccharide binding; Localized in the cytoplasm; Belongs to the CvfB family. (276 aa)    
Predicted Functional Partners:
CAZ98158.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.589
menD
2-oxoglutarate decarboxylase/SHCHC synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.
       0.545
CAZ98865.1
ABC transporter, ATPase component; This protein is the nucleotide-binding domain of the ABC transporters (ABC ATPase); Responsible for coupling the energy of ATP hydrolysis to conformational changes in the permease component (ABC membrane); Contains a duplicated ATPase domain; Belongs to the ABC transporter family, EF3 subfamily; Localized in the cytoplasm near of the cytoplasmic membrane by association with a membrane permease component; Family membership.
 
     0.505
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
       0.491
CAZ98160.1
Conserved hypothetical protein; Protein with a simple bitopic topology: a short N-terminal cytoplasmic segment fused to a large carboxy periplasmic domain through a single transmembrane domain that could be involved in the cell division; Contains a central transmembrane segments; Localized in the cytoplasmic membrane.
       0.458
menF
The isochorismate synthase, called also isochorismate mutase catalyses the conversion of chorismate to isochorismate, the first step in the biosynthesis of both respiratory chain components: menaquinone (MK, vitamin K2) and phylloquinone (vitamin K1); Localized in the cytoplasm; High confidence in function and specificity.
       0.451
CAZ98155.1
Esterase; Conserved esterase belonging to the thioesterase superfamily. Its specificity is unknown. Localized in the cytoplasm; Specificity unclear.
       0.448
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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