Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ94077.1 | CAZ98177.1 | ZOBELLIA_4 | ZOBELLIA_4041 | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplamic space; Conserved hypothetical protein. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | 0.403 |
| CAZ94598.1 | CAZ98177.1 | ZOBELLIA_527 | ZOBELLIA_4041 | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 32 and 33; Localized in the periplasmic space; Conserved hypothetical protein. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | 0.511 |
| CAZ95933.1 | CAZ98177.1 | ZOBELLIA_1880 | ZOBELLIA_4041 | Conserved hypothetical periplasmic protein; Signal peptide cleaved between the residues 19 and 20; localized in the periplasmic space; Conserved hypothetical protein. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | 0.574 |
| CAZ96441.1 | CAZ98177.1 | ZOBELLIA_2285 | ZOBELLIA_4041 | BlaR1-type regulatory proteins are signal-transducing proteins that are a fusion protein with a N-terminal zinc metallopeptidase-M56 domain that proteolytically inactivate the cytoplasmic BlaI-type transcriptional repressor, and a beta-lactams-binding domain; Contains at least four transmembrane segments; Localized in the cytoplasmic membrane; Specificity unclear. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | 0.447 |
| CAZ96991.1 | CAZ98177.1 | ZOBELLIA_2844 | ZOBELLIA_4041 | Conserved hypothetical membrane protein; Protein that contains a domain of unknown function DUF1573; Putative lipoprotein signal peptide cleaved between the residues 18 and 19; Possibly localized in the outer membrane; Family membership. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | 0.447 |
| CAZ98177.1 | CAZ94077.1 | ZOBELLIA_4041 | ZOBELLIA_4 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplamic space; Conserved hypothetical protein. | 0.403 |
| CAZ98177.1 | CAZ94598.1 | ZOBELLIA_4041 | ZOBELLIA_527 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 32 and 33; Localized in the periplasmic space; Conserved hypothetical protein. | 0.511 |
| CAZ98177.1 | CAZ95933.1 | ZOBELLIA_4041 | ZOBELLIA_1880 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | Conserved hypothetical periplasmic protein; Signal peptide cleaved between the residues 19 and 20; localized in the periplasmic space; Conserved hypothetical protein. | 0.574 |
| CAZ98177.1 | CAZ96441.1 | ZOBELLIA_4041 | ZOBELLIA_2285 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | BlaR1-type regulatory proteins are signal-transducing proteins that are a fusion protein with a N-terminal zinc metallopeptidase-M56 domain that proteolytically inactivate the cytoplasmic BlaI-type transcriptional repressor, and a beta-lactams-binding domain; Contains at least four transmembrane segments; Localized in the cytoplasmic membrane; Specificity unclear. | 0.447 |
| CAZ98177.1 | CAZ96991.1 | ZOBELLIA_4041 | ZOBELLIA_2844 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | Conserved hypothetical membrane protein; Protein that contains a domain of unknown function DUF1573; Putative lipoprotein signal peptide cleaved between the residues 18 and 19; Possibly localized in the outer membrane; Family membership. | 0.447 |
| CAZ98177.1 | CAZ98178.1 | ZOBELLIA_4041 | ZOBELLIA_4042 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | 0.773 |
| CAZ98177.1 | CAZ98195.1 | ZOBELLIA_4041 | ZOBELLIA_4059 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | Conserved hypothetical membrane protein; Contains fourteen transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | 0.532 |
| CAZ98177.1 | arsC | ZOBELLIA_4041 | ZOBELLIA_4043 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | Arsenate reductase; ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)]. Glutaredoxin functions as the electron donor for arsenate reduction. ArsC also uses molybdenum as a cofactor. ArsC expands the substrate specificity of arsAB pump which can extrude arsenite and antimonite to allow for arsenate pumping and resistance. Localized in the cytoplasm; High confidence in function and specificity. | 0.457 |
| CAZ98177.1 | prfB | ZOBELLIA_4041 | ZOBELLIA_4044 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.481 |
| CAZ98177.1 | tonB2 | ZOBELLIA_4041 | ZOBELLIA_2380 | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | TonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.441 |
| CAZ98178.1 | CAZ98177.1 | ZOBELLIA_4042 | ZOBELLIA_4041 | Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | 0.773 |
| CAZ98178.1 | arsC | ZOBELLIA_4042 | ZOBELLIA_4043 | Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | Arsenate reductase; ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)]. Glutaredoxin functions as the electron donor for arsenate reduction. ArsC also uses molybdenum as a cofactor. ArsC expands the substrate specificity of arsAB pump which can extrude arsenite and antimonite to allow for arsenate pumping and resistance. Localized in the cytoplasm; High confidence in function and specificity. | 0.453 |
| CAZ98178.1 | prfB | ZOBELLIA_4042 | ZOBELLIA_4044 | Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.402 |
| CAZ98195.1 | CAZ98177.1 | ZOBELLIA_4059 | ZOBELLIA_4041 | Conserved hypothetical membrane protein; Contains fourteen transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | 0.532 |
| arsC | CAZ98177.1 | ZOBELLIA_4043 | ZOBELLIA_4041 | Arsenate reductase; ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)]. Glutaredoxin functions as the electron donor for arsenate reduction. ArsC also uses molybdenum as a cofactor. ArsC expands the substrate specificity of arsAB pump which can extrude arsenite and antimonite to allow for arsenate pumping and resistance. Localized in the cytoplasm; High confidence in function and specificity. | TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations; Contains a carboxypeptidase regulatory domain (32-116) and the Plug module (132-229) acting as a channel gate; The signal peptide is cleaved between the residues 18 and 19; Family membership. | 0.457 |
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