STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98187.1Conserved protein belonging to the thioredoxin family. Thioredoxins are small proteins of approximately one hundred amino-acid residues which participate in various redox reactions via the reversible oxidation of an active center disulfide bond; Signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Family membership. (148 aa)    
Predicted Functional Partners:
CAZ97929.1
Conserved hypothetical protein. Localized in the cytoplasm.
 
    0.777
CAZ97930.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.766
CAZ98188.1
Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
       0.642
ZOBELLIA_1062
Pseudogene; C-terminal fragment of conserved protein found in the PhnB family protein; Possibly localized in the cytoplasm; Conserved hypothetical protein.
  
 
 0.520
CAZ95381.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
 
 0.520
CAZ97118.1
Thiol-disulfide oxidoreductase catalyzes the formation of disulfide bond in various substrates. Its exact specificity is not known; Belongs to the thioredoxin family; Localized in the cytoplasm; Specificity unclear.
  
 
 0.520
CAZ98234.1
Thiol-disulfide oxidoreductase catalyzes the formation of disulfide bond in various substrates. Its exact specificity is not known; Contains a N-terminal transmembrane helix; Belongs to the thioredoxin family; Localized in the cytoplasmic membrane; Specificity unclear.
  
 
 0.520
CAZ96013.1
Conserved hypothetical protein; Probably localized in the cytoplasm.
  
     0.502
ptrB
Oligopeptidase B, family S9; Oligopeptidase B Cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. The active site residues are in the order Ser, Asp, His in the sequence; Belongs to the family 9 of the serine peptidases (S9); Signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; High confidence in function and specificity.
       0.469
CAZ98582.1
Protein homologous to thioredoxins, glutaredoxins, and protein disulphide isomerases, and shares with them a redox-active disulphide. Localized in the cytoplasm; Family membership.
  
 
 0.462
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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