STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94480.1Conserved hypothetical protein; Localized in the cytoplasm. (622 aa)    
Predicted Functional Partners:
CAZ94476.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
 
 0.934
CAZ94470.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
  
 0.711
CAZ94479.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.701
CAZ94474.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
  
 0.675
CAZ94481.1
Vgr family protein; Conserved protein belonging to the Vgr family. The Vgr family proteins are associated with some classes of Rhs elements. Localized in the cytoplasm; Family membership.
  
  
 0.626
clpB2
ClpB is a homohexamer that is a part of a stress-induced multi-chaperone system involved in the recovery of the cell from heat-induced damage, in cooperation with dnaK, dnaJ and grpE. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates contributing to the solubilization and refolding of denatured protein aggregates by dnaK; Contains 2 AAA ATPase domains; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the ClpA/ClpB family.
  
  
 0.546
CAZ94482.1
Hypothetical protein; Putatively localized in the cytoplasm.
       0.505
CAZ94484.1
Hypothetical protein; Putatively localized in the cytoplasm.
  
    0.485
CAZ94483.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.476
CAZ94485.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.476
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.