STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98252.1Conserved hypothetical protein; Localized in the cytoplasm. (346 aa)    
Predicted Functional Partners:
CAZ95357.1
Hypothetical protein that contains a N-terminal LuxE domain; Localized in the cytoplasm.
 
 
 0.837
CAZ95527.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.739
CAZ95783.1
Conserved hypothetical protein distantly related to the Auxin-responsive GH3-like proteins; Localized in the cytoplasm.
 
 
 0.732
hemD
Uroporphyrinogen-III synthase is the fourth enzyme in the heme biosynthesis pathway. It catalyzes the reaction: hydroxymethylbilane = uroporphyrinogen III + H2O. Localized in the cytoplasm; High confidence in function and specificity.
  
     0.718
fdx
Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. It binds two 4Fe-4S clusters; Localized in the cytoplasm; Function unclear.
 
  
 0.715
CAZ96595.1
Conserved hypothetical protein; Protein distantly related to the Auxin-responsive GH3-like proteins; Localized in the cytoplasm.
 
 
 0.712
speA
Arginine decarboxylase catalyzes the biosynthesis of agmatine from arginine. It is involved in the putrescine biosynthesis pathway. Uses the pyridoxal- phosphate as prosthetic group linked to a conserved lysine residue; Binds a magnesium ion; Localized in the cytoplasm; High confidence in function and specificity.
  
   
 0.688
CAZ96988.1
Conserved hypothetical protein. Localized in the cytoplasm.
  
     0.684
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
  
  
 0.681
CAZ95898.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.656
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.