STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98327.1Conserved protein belonging to the Xylose isomerase-like TIM barrel family; Localized in the cytoplasm; Family membership. (297 aa)    
Predicted Functional Partners:
CAZ98328.1
L-sorbosone dehydrogenase converts L-sorbosone into 2-keto-L-gulonic acid (2KGA); Uses one of four different quinone as cofactors for the oxidation of sorbosone; Belongs to the Quinoprotein dehydrogenases family; Lipoprotein with a signal peptide cleaved between the residues 20 and 21; Putatively localized in the outer membrane; High confidence in function and specificity.
       0.757
CAZ94628.1
Belongs to the xylose isomerase-like TIM barrel family. Exported by the twin-arginine translocation pathway signal; Specificity unclear.
 
     0.554
CAZ98326.1
Conserved protein belonging to the NAD dependent epimerase/dehydratase family; Localized in the cytoplasm; Family membership.
       0.532
CAZ96390.1
NAD(P)-dependent dehydrogenase; Contains a NAD- and NADP-binding domains with a core Rossmann-type fold; Belongs to the GFO/IDH/MOCA family; Contains an twin-arginine translocation signal peptide; Localized in the cytoplasm; Specificity unclear.
 
    0.457
CAZ95976.1
This protein belongs to the xylose isomerase-like TIM barrel family; Adopts a TIM alpha/beta barrel fold; Localized in the cytoplasm; Family membership.
 
     0.453
CAZ97060.1
Carbohydrate esterase, family CE10; Carbohydrate esterases catalyze the de-O or de-N-acetylation of substituted saccharides; Belongs to the family 10 of the carbohydrate esterases (CE10); Signal peptide cleaved between residues 19 and 20; Localized in the periplasmic space; Specificity unclear.
  
     0.445
CAZ95972.1
NAD(P)-dependent oxidoreductase belonging to the GFO/IDH/MOCA family; Adopts a Rossmann fold; Localized in the cytoplasm; Specificity unclear.
 
    0.422
CAZ98329.1
Putative protein.
       0.419
CAZ96724.1
NAD(P)-dependent dehydrogenase that adoptd a Rossmann fold; Belongs to the GFO/IDH/MOCA family; Contains a twin-arginine translocation signal peptide cleaved between the residues 25 and 26; Localized in the periplasmic space; Specificity unclear.
 
    0.408
CAZ94705.1
Conserved hypothetical protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space.
  
     0.407
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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