Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ95132.1 | dpsA3 | ZOBELLIA_1075 | ZOBELLIA_4245 | Possible Sigma-54 modulation protein; Probably modulates the activity of sigma-54 factor; Belongs to the sigma-54 modulation protein/ribosomal protein S30EA family; Localized in the cytoplasm; Function unclear. | DNA protection during starvation protein; DspA protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Forms a homododecamer and the 12 subunits form a hollow sphere into which the mineral iron core of up to 500 Fe(3+) can be deposited; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the Dps family. | 0.404 |
| CAZ98063.1 | dpsA3 | ZOBELLIA_3925 | ZOBELLIA_4245 | This protein belongs to a family of stress-induced proteins encompassing OsmC from Escherichia coli and OhrB from Bacillus subtilis. Localized in the cytoplasm; Family membership. | DNA protection during starvation protein; DspA protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Forms a homododecamer and the 12 subunits form a hollow sphere into which the mineral iron core of up to 500 Fe(3+) can be deposited; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the Dps family. | 0.433 |
| CAZ98063.1 | katA2 | ZOBELLIA_3925 | ZOBELLIA_3559 | This protein belongs to a family of stress-induced proteins encompassing OsmC from Escherichia coli and OhrB from Bacillus subtilis. Localized in the cytoplasm; Family membership. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.649 |
| CAZ98379.1 | CAZ98381.1 | ZOBELLIA_4244 | ZOBELLIA_4246 | Protein Belongs to the antibiotic biosynthesis monooxygenase (ABM) family; Localized in the cytoplasm; Family membership. | Oxydoreductase NADPH dependent; Belongs to the aldo/keto reductase 2 family; Localized in the cytoplasm; Family membership. | 0.545 |
| CAZ98379.1 | CAZ98382.1 | ZOBELLIA_4244 | ZOBELLIA_4247 | Protein Belongs to the antibiotic biosynthesis monooxygenase (ABM) family; Localized in the cytoplasm; Family membership. | Belongs to the short-chain dehydrogenases/reductases (SDR) family, Glucose/ribitol dehydrogenase subfamily; Most dehydrogenases possess at least 2 domains, the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis; Possible signal peptide cleaved between the residues 24 and 25; Putatively localized in the periplasmic space; Family membership. | 0.511 |
| CAZ98379.1 | dpsA3 | ZOBELLIA_4244 | ZOBELLIA_4245 | Protein Belongs to the antibiotic biosynthesis monooxygenase (ABM) family; Localized in the cytoplasm; Family membership. | DNA protection during starvation protein; DspA protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Forms a homododecamer and the 12 subunits form a hollow sphere into which the mineral iron core of up to 500 Fe(3+) can be deposited; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the Dps family. | 0.588 |
| CAZ98381.1 | CAZ98379.1 | ZOBELLIA_4246 | ZOBELLIA_4244 | Oxydoreductase NADPH dependent; Belongs to the aldo/keto reductase 2 family; Localized in the cytoplasm; Family membership. | Protein Belongs to the antibiotic biosynthesis monooxygenase (ABM) family; Localized in the cytoplasm; Family membership. | 0.545 |
| CAZ98381.1 | CAZ98382.1 | ZOBELLIA_4246 | ZOBELLIA_4247 | Oxydoreductase NADPH dependent; Belongs to the aldo/keto reductase 2 family; Localized in the cytoplasm; Family membership. | Belongs to the short-chain dehydrogenases/reductases (SDR) family, Glucose/ribitol dehydrogenase subfamily; Most dehydrogenases possess at least 2 domains, the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis; Possible signal peptide cleaved between the residues 24 and 25; Putatively localized in the periplasmic space; Family membership. | 0.756 |
| CAZ98381.1 | alkB2 | ZOBELLIA_4246 | ZOBELLIA_4248 | Oxydoreductase NADPH dependent; Belongs to the aldo/keto reductase 2 family; Localized in the cytoplasm; Family membership. | Alpha-ketoglutarate-dependent dioxygenase repairs alkylated DNA containing 1-methyladenine and 3-methylcytosine by oxidative demethylation. Has a strong preference for single-stranded DNA. May also act on RNA. Requires molecular oxygen, alpha-ketoglutarate and iron. Localized in the cytoplasm; High confidence in function and specificity. | 0.515 |
| CAZ98381.1 | dpsA3 | ZOBELLIA_4246 | ZOBELLIA_4245 | Oxydoreductase NADPH dependent; Belongs to the aldo/keto reductase 2 family; Localized in the cytoplasm; Family membership. | DNA protection during starvation protein; DspA protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Forms a homododecamer and the 12 subunits form a hollow sphere into which the mineral iron core of up to 500 Fe(3+) can be deposited; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the Dps family. | 0.710 |
| CAZ98382.1 | CAZ98379.1 | ZOBELLIA_4247 | ZOBELLIA_4244 | Belongs to the short-chain dehydrogenases/reductases (SDR) family, Glucose/ribitol dehydrogenase subfamily; Most dehydrogenases possess at least 2 domains, the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis; Possible signal peptide cleaved between the residues 24 and 25; Putatively localized in the periplasmic space; Family membership. | Protein Belongs to the antibiotic biosynthesis monooxygenase (ABM) family; Localized in the cytoplasm; Family membership. | 0.511 |
| CAZ98382.1 | CAZ98381.1 | ZOBELLIA_4247 | ZOBELLIA_4246 | Belongs to the short-chain dehydrogenases/reductases (SDR) family, Glucose/ribitol dehydrogenase subfamily; Most dehydrogenases possess at least 2 domains, the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis; Possible signal peptide cleaved between the residues 24 and 25; Putatively localized in the periplasmic space; Family membership. | Oxydoreductase NADPH dependent; Belongs to the aldo/keto reductase 2 family; Localized in the cytoplasm; Family membership. | 0.756 |
| CAZ98382.1 | alkB2 | ZOBELLIA_4247 | ZOBELLIA_4248 | Belongs to the short-chain dehydrogenases/reductases (SDR) family, Glucose/ribitol dehydrogenase subfamily; Most dehydrogenases possess at least 2 domains, the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis; Possible signal peptide cleaved between the residues 24 and 25; Putatively localized in the periplasmic space; Family membership. | Alpha-ketoglutarate-dependent dioxygenase repairs alkylated DNA containing 1-methyladenine and 3-methylcytosine by oxidative demethylation. Has a strong preference for single-stranded DNA. May also act on RNA. Requires molecular oxygen, alpha-ketoglutarate and iron. Localized in the cytoplasm; High confidence in function and specificity. | 0.551 |
| CAZ98382.1 | dpsA3 | ZOBELLIA_4247 | ZOBELLIA_4245 | Belongs to the short-chain dehydrogenases/reductases (SDR) family, Glucose/ribitol dehydrogenase subfamily; Most dehydrogenases possess at least 2 domains, the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis; Possible signal peptide cleaved between the residues 24 and 25; Putatively localized in the periplasmic space; Family membership. | DNA protection during starvation protein; DspA protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Forms a homododecamer and the 12 subunits form a hollow sphere into which the mineral iron core of up to 500 Fe(3+) can be deposited; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the Dps family. | 0.661 |
| actP | dpsA3 | ZOBELLIA_1166 | ZOBELLIA_4245 | ActP is a P-type ATPase responsible for copper efflux using ATP hydrolysis for energy. ActP controls copper homeostasis. Belongs to the cation transport P-type ATPase family. Features eight transmembrane helices. Localized in the cytoplasmic membrane; High confidence in function and specificity. | DNA protection during starvation protein; DspA protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Forms a homododecamer and the 12 subunits form a hollow sphere into which the mineral iron core of up to 500 Fe(3+) can be deposited; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the Dps family. | 0.405 |
| alkB2 | CAZ98381.1 | ZOBELLIA_4248 | ZOBELLIA_4246 | Alpha-ketoglutarate-dependent dioxygenase repairs alkylated DNA containing 1-methyladenine and 3-methylcytosine by oxidative demethylation. Has a strong preference for single-stranded DNA. May also act on RNA. Requires molecular oxygen, alpha-ketoglutarate and iron. Localized in the cytoplasm; High confidence in function and specificity. | Oxydoreductase NADPH dependent; Belongs to the aldo/keto reductase 2 family; Localized in the cytoplasm; Family membership. | 0.515 |
| alkB2 | CAZ98382.1 | ZOBELLIA_4248 | ZOBELLIA_4247 | Alpha-ketoglutarate-dependent dioxygenase repairs alkylated DNA containing 1-methyladenine and 3-methylcytosine by oxidative demethylation. Has a strong preference for single-stranded DNA. May also act on RNA. Requires molecular oxygen, alpha-ketoglutarate and iron. Localized in the cytoplasm; High confidence in function and specificity. | Belongs to the short-chain dehydrogenases/reductases (SDR) family, Glucose/ribitol dehydrogenase subfamily; Most dehydrogenases possess at least 2 domains, the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis; Possible signal peptide cleaved between the residues 24 and 25; Putatively localized in the periplasmic space; Family membership. | 0.551 |
| alkB2 | dpsA3 | ZOBELLIA_4248 | ZOBELLIA_4245 | Alpha-ketoglutarate-dependent dioxygenase repairs alkylated DNA containing 1-methyladenine and 3-methylcytosine by oxidative demethylation. Has a strong preference for single-stranded DNA. May also act on RNA. Requires molecular oxygen, alpha-ketoglutarate and iron. Localized in the cytoplasm; High confidence in function and specificity. | DNA protection during starvation protein; DspA protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Forms a homododecamer and the 12 subunits form a hollow sphere into which the mineral iron core of up to 500 Fe(3+) can be deposited; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the Dps family. | 0.472 |
| clpS | dpsA3 | ZOBELLIA_2782 | ZOBELLIA_4245 | ClpS is involved in the modulation of the specificity of the clpAP-mediated ATP-dependent protein degradation. It binds to the N-terminal domain of the chaperone ClpA. Localized in the cytoplasm; High confidence in function and specificity. | DNA protection during starvation protein; DspA protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Forms a homododecamer and the 12 subunits form a hollow sphere into which the mineral iron core of up to 500 Fe(3+) can be deposited; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the Dps family. | 0.529 |
| dpsA3 | CAZ95132.1 | ZOBELLIA_4245 | ZOBELLIA_1075 | DNA protection during starvation protein; DspA protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Forms a homododecamer and the 12 subunits form a hollow sphere into which the mineral iron core of up to 500 Fe(3+) can be deposited; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the Dps family. | Possible Sigma-54 modulation protein; Probably modulates the activity of sigma-54 factor; Belongs to the sigma-54 modulation protein/ribosomal protein S30EA family; Localized in the cytoplasm; Function unclear. | 0.404 |
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