STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98415.1Contains two transmembrane segments in the N-terminal part of protein; Signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic membrane; Conserved hypothetical protein. (440 aa)    
Predicted Functional Partners:
CAZ98416.1
Protein possibly involved in the Phospholipid binding; Belongs to the phosphatidylethanolamine-binding protein (PEBP) family; Lipoprotein-type signal peptide cleaved between the residues 17 and 18; Localized in the outer membrane; Function unclear.
      0.902
CAZ97467.1
Conserved hypothetical membrane protein; Protein that displays two parts: a N-terminal part that cooperatively binds calcium ions by two EF-hand domains and a conserved C-terminal part of unknown function; Putative lipoprotein signal peptide cleaved between the residues 16 and 17; Possibly localized in the outer membrane; Conserved hypothetical protein.
 
     0.756
CAZ96702.1
Conserved membrane lipoprotein; Lipoprotein with a signal peptide cleaved between the residues 25 and 26; Localized in the outer memebrane; Conserved hypothetical protein.
  
     0.735
CAZ98417.1
Conserved hypothetical membrane protein; Putative lipoprotein signal peptide cleaved between the residues 20 and 21; Possibly localized in the outer membrane; Conserved hypothetical protein.
       0.723
CAZ96704.1
Conserved membrane lipoprotein; Lipoprotein with a signal peptide cleaved between the residues 20 and 21; Localized in the outer membrane; Conserved hypothetical protein.
 
     0.714
CAZ98414.1
The ABC-1 type transporters have their ABC membrane domain and their ABC ATPase domain fused in the same protein. They are involved in the efflux of compounds across the biological membranes or in targeting of membrane components; Contains five N-terminal transmembrane segments (ABC membrane) that form a pore in the cytoplasmic membrane an a C-terminal ATP-binding domain (ABC ATPase) responsible for energy generation; Belongs to the ABC-1 type transporter permease/ATP-binding family, lipid exporter subfamily (msbA); Family membership.
 
   0.699
CAZ97600.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 29 and 30; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.665
CAZ98418.1
The response regulator proteins are involved in the two-component signal transduction systems to detect and respond to environmental changes. The protein consists of two domains, an N-terminal response regulator receiver domain that is substrate for a histidine protein kinase sensor, and a variable C-terminal effector domain with DNA-binding activity, a LytTR-type HTH domain, that acts as transcriptional regulator; Family membership.
 
     0.655
CAZ96701.1
Protein that contains five repeats of twenty aminoacids The MORN (membrane occupation and recognition nexus) repeats would contribute to the cytoplasmic membrane binding, possibly by interacting with phospholipids; Putative lipoprotein signal peptide cleaved between the residues 18 and 19; possibly localized in the outer membrane; Conserved hypothetical protein.
 
     0.653
CAZ97442.1
TonB-dependent Receptor; Protein localized in the outer membrane involved in uptake of macromolecules that are too large to diffuse via the outer membrane porins channels or are encountered at very low concentrations. Contains a carboxypeptidase regulatory domain (21-107) and the Plug module (120-210) acting as a channel gate. The signal peptide is cleaved between the residues 16 and 17; Family membership.
  
     0.597
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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