STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98472.1Conserved protein belonging to the acyltransferase family. Its exact function is unclear. Features ten transmembrane helices. Localized in the cytoplasmic membrane; Family membership. (366 aa)    
Predicted Functional Partners:
CAZ98471.1
Conserved protein containing three ankyrin repeats, one of the most common protein-protein interaction motifs in nature; Signal peptide cleaved between the residues 27 and 28; Localized in the periplasmic space; Function unclear.
 
     0.928
CAZ98470.1
AraC-type transcriptional regulator; Modular protein containing two N-terminal AraC-type HTH DNA-binding domains involved in the binding of the protein to the operator sequences in the DNA followed by two C-terminal Tetratricopeptide repeats. AraC-type transcriptional regulators are usually involved in the positive regulation of catabolic, metabolic and transport operons. TPR repeats mediate proteinprotein interactions and the assembly of multiprotein complexes. A single TPR contains two antiparallel alpha helices which pack into an open structure such that tandem arrays of TPR motifs [...]
 
     0.874
CAZ98473.1
Protein phosphatase with activity toward tyrosine-protein phosphate as well as toward serine-protein phosphate. Features a signal peptide cleaved between the residues 23 and 24. Localized in the periplasm; Specificity unclear.
       0.481
CAZ98290.1
Hypothetical membrane protein; Protein that could belong to the akaline phosphatase superfamily; Contains five N-terminal transmembrane segments and three C-terminal TPR repeats involved in proteinprotein interactions and the assembly of multiprotein complexes; Localized in the cytoplasmic membrane; Hypothetical protein.
  
  
 0.412
CAZ98291.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.401
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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