STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98499.1Hypothetical protein. Putatively localized in the cytoplasm. (169 aa)    
Predicted Functional Partners:
sqrA
Sulfide:quinone oxidoreductase; Enzyme that uses electrons from H2S to reduce quinones with the use of NADP. S0 is oxidized to sulfite and water. This process confers resistance to heavy metals such as cadmium and cisplatin; Binds 1 FAD noncovalently as cofactors; Belongs to the Pyridine nucleotide- disulphide oxidoreductase family; Localized in the cytoplasm; High confidence in function and specificity.
       0.509
CAZ98500.1
Putative protein.
       0.406
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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