STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98532.1Conserved hypothetical protein; Localized in the cytoplasm. (285 aa)    
Predicted Functional Partners:
nrtB
Nitrate-specific BPD transport, permease component; Probably part of a high-affinity binding-protein-dependent (BPD) transport system for nitrate; probably responsible for the translocation of the substrate across the membrane; Localized in the cytoplasmic membrane by six transmembrane segments; High confidence in function and specificity.
  
  
 0.732
nbaC
3-Hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.
 
    0.718
nrtC
Nitrate-specific ABC transporter, ATPase component; This protein is the nucleotide-binding domain of the ABC transporters (ABC ATPase) encoded by a different gene of those that encode for the ABC transporter permease component (ABC membrane); Probably part of a high-affinity binding-protein-dependent transport system for nitrate. Probably responsible for energy coupling to the transport system; Family membership.
  
  
 0.673
nrtD
Nitrate-specific ABC transporter, ATPase component; This protein is the nucleotide-binding domain of the ABC transporters (ABC ATPase) encoded by a different gene of those that encode for the ABC transporter permease component (ABC membrane); Probably part of a high-affinity binding-protein-dependent transport system for nitrate. Probably responsible for energy coupling to the transport system; Family membership.
  
  
 0.673
udpA
Uridine phosphorylase catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis; Forms a homohexamer; Localized in the cytoplasm; High confidence in function and specificity.
       0.609
kmoA
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
  
   
 0.583
CAZ98530.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.582
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
 
     0.564
CAZ98533.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 26 and 27; Localized in the periplasmic space; Conserved hypothetical protein.
       0.563
CAZ98528.1
Conserved dioxygenase of unknown specificity. Belongs to the 2OG-Fe(II) oxygenase superfamily, which includes various enzymes such as Leucoanthocyanidin dioxygenase, flavanone 3-hydroxylase and Gibberellin 20 oxidase. Localized in the cytoplasm; Specificity unclear.
 
    0.559
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.