Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ95937.1 | CAZ96892.1 | ZOBELLIA_1884 | ZOBELLIA_2742 | Conserved hypothetical protein belonging to the DUF1094 family; Localized in the cytoplasm; Belongs to the UPF0403 family. | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein. | 0.474 |
| CAZ95937.1 | CAZ98567.1 | ZOBELLIA_1884 | ZOBELLIA_4432 | Conserved hypothetical protein belonging to the DUF1094 family; Localized in the cytoplasm; Belongs to the UPF0403 family. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.628 |
| CAZ95937.1 | yfiT | ZOBELLIA_1884 | ZOBELLIA_2836 | Conserved hypothetical protein belonging to the DUF1094 family; Localized in the cytoplasm; Belongs to the UPF0403 family. | Putative metal-dependent hydrolase YfiT; YfiT exists as a dimer and binds Ni(2+) in a 1:1 stoichiometry. The protein has an unusual four-helix bundle topology and coordinates Ni(2+) in an octahedral geometry with three conserved histidines and three waters. Although there is no similarity in their overall structures, the coordination geometry of the metal and the residues that constitute the putative active site in YfiT are; Function unclear. | 0.459 |
| CAZ96892.1 | CAZ95937.1 | ZOBELLIA_2742 | ZOBELLIA_1884 | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein. | Conserved hypothetical protein belonging to the DUF1094 family; Localized in the cytoplasm; Belongs to the UPF0403 family. | 0.474 |
| CAZ96892.1 | CAZ98567.1 | ZOBELLIA_2742 | ZOBELLIA_4432 | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.462 |
| CAZ98566.1 | CAZ98567.1 | ZOBELLIA_4431 | ZOBELLIA_4432 | Hypothetical membrane protein; Contains three transmembrane helices; Localized in the cytoplasmic membrane; Hypothetical protein. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.473 |
| CAZ98567.1 | CAZ95937.1 | ZOBELLIA_4432 | ZOBELLIA_1884 | Conserved hypothetical protein; Localized in the cytoplasm. | Conserved hypothetical protein belonging to the DUF1094 family; Localized in the cytoplasm; Belongs to the UPF0403 family. | 0.628 |
| CAZ98567.1 | CAZ96892.1 | ZOBELLIA_4432 | ZOBELLIA_2742 | Conserved hypothetical protein; Localized in the cytoplasm. | Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein. | 0.462 |
| CAZ98567.1 | CAZ98566.1 | ZOBELLIA_4432 | ZOBELLIA_4431 | Conserved hypothetical protein; Localized in the cytoplasm. | Hypothetical membrane protein; Contains three transmembrane helices; Localized in the cytoplasmic membrane; Hypothetical protein. | 0.473 |
| CAZ98567.1 | yfiT | ZOBELLIA_4432 | ZOBELLIA_2836 | Conserved hypothetical protein; Localized in the cytoplasm. | Putative metal-dependent hydrolase YfiT; YfiT exists as a dimer and binds Ni(2+) in a 1:1 stoichiometry. The protein has an unusual four-helix bundle topology and coordinates Ni(2+) in an octahedral geometry with three conserved histidines and three waters. Although there is no similarity in their overall structures, the coordination geometry of the metal and the residues that constitute the putative active site in YfiT are; Function unclear. | 0.478 |
| yfiT | CAZ95937.1 | ZOBELLIA_2836 | ZOBELLIA_1884 | Putative metal-dependent hydrolase YfiT; YfiT exists as a dimer and binds Ni(2+) in a 1:1 stoichiometry. The protein has an unusual four-helix bundle topology and coordinates Ni(2+) in an octahedral geometry with three conserved histidines and three waters. Although there is no similarity in their overall structures, the coordination geometry of the metal and the residues that constitute the putative active site in YfiT are; Function unclear. | Conserved hypothetical protein belonging to the DUF1094 family; Localized in the cytoplasm; Belongs to the UPF0403 family. | 0.459 |
| yfiT | CAZ98567.1 | ZOBELLIA_2836 | ZOBELLIA_4432 | Putative metal-dependent hydrolase YfiT; YfiT exists as a dimer and binds Ni(2+) in a 1:1 stoichiometry. The protein has an unusual four-helix bundle topology and coordinates Ni(2+) in an octahedral geometry with three conserved histidines and three waters. Although there is no similarity in their overall structures, the coordination geometry of the metal and the residues that constitute the putative active site in YfiT are; Function unclear. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.478 |