STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98632.1Conserved hypothetical protein; Localized in the cytoplasm. (105 aa)    
Predicted Functional Partners:
CAZ98633.1
Glycosyl transferase, family GT 2; Glycosyl transferase possibly involved in the cell wall biosynthesis; Belongs to the family 2 of glycosyl transferases (GT2); Localized in the cytoplasm; Family membership.
 
     0.881
CAZ98630.1
Conserved hypothetical protein. Localized in the cytoplasm.
 
     0.863
CAZ98902.1
Conserved hypothetical protein. Localized in the cytoplasm.
  
     0.774
CAZ97275.1
Small protein that contain a C-terminal Smr (Small MutS Related) domain; The Smr domain would act as a nicking endonuclease and would interact with the MutS-1 protein; Belongs to the DNA mismatch repair mutS family; Localized in the cytoplasm; Function unclear.
  
     0.712
CAZ98103.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.703
CAZ96921.1
Metallophosphoesterase; Conserved protein belonging to the metallophosphoesterase family. The most conserved regions in this superfamily centre around the metal chelating residues. Localized in the cytoplasm; Specificity unclear.
  
     0.698
hemD
Uroporphyrinogen-III synthase is the fourth enzyme in the heme biosynthesis pathway. It catalyzes the reaction: hydroxymethylbilane = uroporphyrinogen III + H2O. Localized in the cytoplasm; High confidence in function and specificity.
  
     0.669
CAZ94782.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.658
CAZ98903.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.642
HsdM2
The type I restriction enzyme, M and S subunits together form a N-6 adenine methyltransferase (MTase) that methylates the amino group at the C-6 position of a adenine residue in a hemimethylated bipartite DNA recognition sequence, in order to prevent the host from digesting its own genome via its restriction enzyme. It acts as a maintenance MTase modifying the DNA so that both strands become methylated. If the recognition sequence is unmethylated, in the presence of the R subunit, the complex can also act as an endonuclease, binding to the same target sequence but cutting the DNA some [...]
  
 
 0.627
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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