STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98633.1Glycosyl transferase, family GT 2; Glycosyl transferase possibly involved in the cell wall biosynthesis; Belongs to the family 2 of glycosyl transferases (GT2); Localized in the cytoplasm; Family membership. (333 aa)    
Predicted Functional Partners:
CAZ98632.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.881
ribF
Riboflavin biosynthesis protein RibF is a protein that includes a Riboflavin kinase activity and a FMN adenylyltransferase activity; Localized in the cytoplasm; High confidence in function and specificity.
 
    0.822
CAZ98630.1
Conserved hypothetical protein. Localized in the cytoplasm.
 
     0.808
CAZ96045.1
Conserved protein involved in exopolysaccharide biosynthesis. Its exact function is unknown. Contains five transmembrane helices. Localized in the cytoplasmic membrane; Function unclear.
 
  
 0.805
rmlC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.793
rmlD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.774
rmlB
dTDP-glucose 4,6-dehydratase converts the dTDP-glucose to dTDP-4-dehydro-6-deoxy-D-glucose. This enzyme is involved in the nucleotide sugar metabolism and in the lipopolysaccharide biosynthesis; Belongs to the NAD dependent epimerase/dehydratase family, Rossmann fold Superfamily; Localized in the cytoplasm; High confidence in function and specificity.
 
  
 0.689
waaE
Putatively involved in the Lipopolysaccharide core biosynthesis; Belongs to the family 2 of glycosyl transferase (GT2), WaaE/kdtX subfamily; Localized in the cytoplasm; Function unclear.
 
  
 0.657
ppmA
Polyprenol phosphate mannose synthase catalyses the transfer of mannose from GDP-mannose to polyprenol phosphate. Polyprenol phosphate mannose is a sugar donor; Belongs to the family 2 of the glycosyltransferases (GT2); Localized in the cytoplasm; High confidence in function and specificity.
 
  
 0.644
rmlA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.621
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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