STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98675.1Peptidase family M14 contains mainly metallocarboxypeptidases. The single catalytic zinc ion is tetrahedrally coordinated by two histidines and a glutamate, as well as a water molecule. One of the histidines and the glutamate occur in the motif His-Xaa-Xaa-Glu; Localized in the cytoplasm; Specificity unclear. (369 aa)    
Predicted Functional Partners:
asnC3
The transcriptional regulator AsnC is the activator of the asnA gene involved in the asparagine synthesis and is a autogenous regulator of its own transcription; Contains a N-terminal AsnC/Lrp-type HTH domain; Localized in the cytoplasm; High confidence in function and specificity.
 
     0.594
CAZ98677.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.496
CAZ98676.1
Transcriptional regulator with a helix-turn-helix DNA-binding motif located in the N-terminal part. The C-terminal part may contain an oligomerization domain; Belongs to the Cro/C1-type transcriptional regulator family; Localized in the cytoplasm; Family membership.
 
     0.479
mvkA
Mevalonate kinase catalyses the phosphorylation of mevalonate to phosphomevalonate from AT as donor; Uses the magnesium ions as cofactor; CTP, GTP and UTP can also act as donors; Belongs to the GHMP kinase family; Localized in the cytoplasm; High confidence in function and specificity.
  
     0.415
CAZ94605.1
Acyltransferase catalyzes of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier. This enzyme belongs to an acyltransferase family including enzymes involved in phospholipid biosynthesis. Its exact specificity is unknown. Localized in the cytoplasm; Specificity unclear.
  
     0.415
CAZ94756.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.405
CAZ98673.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.402
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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