STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98684.1Conserved protein containing a C-terminal OmpA-like domain. OmpA-like domains are thought to be responsible for non-covalent interactions with peptidoglycan; Signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space and/or in the outer membrane; Family membership. (256 aa)    
Predicted Functional Partners:
CAZ98039.1
The sensor histidine kinase belongs to two-component signal transduction systems. It autophosphorylates an histidine in its phosphoacceptor domain and phosphorylates an aspartic acid present in the response regulator receiver domain; Contains a CheB-type methylesterase catalytic domain and a CheR-type methyltransferase domain, both involved in the bacterial chemotaxis system; Contains a PAS/PAC domain; Seems localized in the cytoplasm; Family membership.
  
  
 0.873
CAZ98685.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.724
CAZ96560.1
Conserved protein containing calx-beta domain; Contains two repeats of the calx-motif in the N-terminal domain (residues 34 to 128 and 142 to 254); The calx-motif is present as a tandem repeat in the cytoplasmic domains of Calx Na-Ca exchangers, which are used to expel calcium from cells; Signal peptide cleaved between the residues 35 and 36; Protein possibly localised in the outer membrane (PSORT result); Contains the endopeptidase Clp signature (residues 310-321; Prosite result); Conserved hypothetical protein.
 
     0.705
CAZ97276.1
Conserved hypothetical lipoprotein; Liporptein with a signal peptide cleaved between the residues 15 and 16; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.702
CAZ94799.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.677
CAZ98882.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 19 and 20; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.675
CAZ98193.1
Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.644
CAZ94711.1
Hypothetical membrane protein; Proteins that probably binds the calcium ions; Contains fifteen type-3 thrombospondin repeats; signal peptide cleaved between the residues 33 and 34; probably localized in the outer membrane; Hypothetical protein.
 
     0.640
CAZ95760.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
  
   
 0.637
CAZ98288.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.630
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.