Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ94849.1 | CAZ98716.1 | ZOBELLIA_783 | ZOBELLIA_4581 | Protein belonging to the DUF1624 family; Contains eight transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | 0.430 |
| CAZ94974.1 | CAZ98716.1 | ZOBELLIA_911 | ZOBELLIA_4581 | Conserved hypothetical membrane protein; Protein containing two tandem domains belonging to the DUF6 family. Predicted as a transporter; Contains ten transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | 0.403 |
| CAZ96828.1 | CAZ98716.1 | ZOBELLIA_2678 | ZOBELLIA_4581 | Sugar-phosphate isomerases catalyse the conversion of sugar-phosphate to another sugar-phosphate; Contains a Glucose-6-phosphate isomerase domain; Binds 1 iron ion per subunit; Belongs to the cupin superfamily, archaeal-type GPI family; Localized in the cytoplasm; Specificity unclear. | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | 0.414 |
| CAZ97802.1 | CAZ98716.1 | ZOBELLIA_3664 | ZOBELLIA_4581 | TPR repeats protein; Conserved protein containing a N-terminal domain of unknown function and six C-terminal tetratrico peptide repeats. TPR repeats mediate proteinprotein interactions and the assembly of multiprotein complexes; Signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space; Function unclear. | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | 0.431 |
| CAZ98496.1 | CAZ98497.1 | ZOBELLIA_4361 | ZOBELLIA_4362 | ABC transporter, ATPase component; This protein is the nucleotide-binding domain of the ABC transporters (ABC ATPase) encoded by a different gene of those that encode for the ABC transporter permease component (ABC membrane); Family membership. | Aminopeptidase, family M1; Integral membrane protein with a C-terminal aminopeptidase domain. Belongs to the family M1 of the peptidase. A catalytic zinc ion is bound by two histidines and a glutamate. The histidines are within an 'HEXXH' motif on one long helix with the glutamate on another antiparallel helix. The catalytic mechanism is believed to involve activation of a water molecule by the zinc ion. The glutamate of the HEXXH motif is known to be important for catalysis and a tyrosine may also be involved. Features 13 transmembrane helices; Specificity unclear. | 0.956 |
| CAZ98496.1 | CAZ98716.1 | ZOBELLIA_4361 | ZOBELLIA_4581 | ABC transporter, ATPase component; This protein is the nucleotide-binding domain of the ABC transporters (ABC ATPase) encoded by a different gene of those that encode for the ABC transporter permease component (ABC membrane); Family membership. | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | 0.401 |
| CAZ98497.1 | CAZ98496.1 | ZOBELLIA_4362 | ZOBELLIA_4361 | Aminopeptidase, family M1; Integral membrane protein with a C-terminal aminopeptidase domain. Belongs to the family M1 of the peptidase. A catalytic zinc ion is bound by two histidines and a glutamate. The histidines are within an 'HEXXH' motif on one long helix with the glutamate on another antiparallel helix. The catalytic mechanism is believed to involve activation of a water molecule by the zinc ion. The glutamate of the HEXXH motif is known to be important for catalysis and a tyrosine may also be involved. Features 13 transmembrane helices; Specificity unclear. | ABC transporter, ATPase component; This protein is the nucleotide-binding domain of the ABC transporters (ABC ATPase) encoded by a different gene of those that encode for the ABC transporter permease component (ABC membrane); Family membership. | 0.956 |
| CAZ98497.1 | CAZ98716.1 | ZOBELLIA_4362 | ZOBELLIA_4581 | Aminopeptidase, family M1; Integral membrane protein with a C-terminal aminopeptidase domain. Belongs to the family M1 of the peptidase. A catalytic zinc ion is bound by two histidines and a glutamate. The histidines are within an 'HEXXH' motif on one long helix with the glutamate on another antiparallel helix. The catalytic mechanism is believed to involve activation of a water molecule by the zinc ion. The glutamate of the HEXXH motif is known to be important for catalysis and a tyrosine may also be involved. Features 13 transmembrane helices; Specificity unclear. | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | 0.517 |
| CAZ98716.1 | CAZ94849.1 | ZOBELLIA_4581 | ZOBELLIA_783 | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | Protein belonging to the DUF1624 family; Contains eight transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | 0.430 |
| CAZ98716.1 | CAZ94974.1 | ZOBELLIA_4581 | ZOBELLIA_911 | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | Conserved hypothetical membrane protein; Protein containing two tandem domains belonging to the DUF6 family. Predicted as a transporter; Contains ten transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein. | 0.403 |
| CAZ98716.1 | CAZ96828.1 | ZOBELLIA_4581 | ZOBELLIA_2678 | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | Sugar-phosphate isomerases catalyse the conversion of sugar-phosphate to another sugar-phosphate; Contains a Glucose-6-phosphate isomerase domain; Binds 1 iron ion per subunit; Belongs to the cupin superfamily, archaeal-type GPI family; Localized in the cytoplasm; Specificity unclear. | 0.414 |
| CAZ98716.1 | CAZ97802.1 | ZOBELLIA_4581 | ZOBELLIA_3664 | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | TPR repeats protein; Conserved protein containing a N-terminal domain of unknown function and six C-terminal tetratrico peptide repeats. TPR repeats mediate proteinprotein interactions and the assembly of multiprotein complexes; Signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space; Function unclear. | 0.431 |
| CAZ98716.1 | CAZ98496.1 | ZOBELLIA_4581 | ZOBELLIA_4361 | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | ABC transporter, ATPase component; This protein is the nucleotide-binding domain of the ABC transporters (ABC ATPase) encoded by a different gene of those that encode for the ABC transporter permease component (ABC membrane); Family membership. | 0.401 |
| CAZ98716.1 | CAZ98497.1 | ZOBELLIA_4581 | ZOBELLIA_4362 | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | Aminopeptidase, family M1; Integral membrane protein with a C-terminal aminopeptidase domain. Belongs to the family M1 of the peptidase. A catalytic zinc ion is bound by two histidines and a glutamate. The histidines are within an 'HEXXH' motif on one long helix with the glutamate on another antiparallel helix. The catalytic mechanism is believed to involve activation of a water molecule by the zinc ion. The glutamate of the HEXXH motif is known to be important for catalysis and a tyrosine may also be involved. Features 13 transmembrane helices; Specificity unclear. | 0.517 |
| CAZ98716.1 | CAZ98717.1 | ZOBELLIA_4581 | ZOBELLIA_4582 | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | Conserved hypothetical protein; Localized in the cytoplasm. | 0.586 |
| CAZ98716.1 | CAZ98718.1 | ZOBELLIA_4581 | ZOBELLIA_4583 | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | Proteins in the PIN domain family are Localized in the cytoplasm; Function unclear. | 0.593 |
| CAZ98716.1 | tnpR | ZOBELLIA_4581 | ZOBELLIA_4590 | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | Transposon resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products. It contains an N-terminal catalytic and dimerization domain that contains a conserved serine residue involved in the transient covalent attachment to DNA, and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine Recombinase family, Resolvase and Invertase subfamily; Localized in the cytoplasm; High confidence in function and specificity. | 0.431 |
| CAZ98717.1 | CAZ98716.1 | ZOBELLIA_4582 | ZOBELLIA_4581 | Conserved hypothetical protein; Localized in the cytoplasm. | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | 0.586 |
| CAZ98717.1 | CAZ98718.1 | ZOBELLIA_4582 | ZOBELLIA_4583 | Conserved hypothetical protein; Localized in the cytoplasm. | Proteins in the PIN domain family are Localized in the cytoplasm; Function unclear. | 0.778 |
| CAZ98718.1 | CAZ98716.1 | ZOBELLIA_4583 | ZOBELLIA_4581 | Proteins in the PIN domain family are Localized in the cytoplasm; Function unclear. | Serine recombinases perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase; Contains an N-terminal catalytic and dimerization domain (with the conserved serine residue), a central conserved domain usually associated with recombinases and a C-terminal helix-turn-helix DNA-binding domain; Belongs to the site-specific Serine recombinase family; Localized in the cytoplasm; High confidence in function and specificity. | 0.593 |
page 1 of 2